AMCG00014915


Basic Information

Item Value
gene id AMCG00014915
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39592614 ~ 39599496 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014915
CGAGCGCAGCGCTACTGCACACTGCGCAGCTCGGCGGACACACCGGGCTCCCTGTCTGTGTATTGAGTGTGTAGGTGGAGGGGTGGGGTGACTGGTATGCAGTTGTCCTCGGTGCCGCTCTCTCTGCTGCCCCTGCTGGCCGCCCAGTGCCTCTGTAGCCTGGCGGATGGGCCCCACCCCCGTCGCCATGACTACTGCGTGCTGGGGGCTGGGCCGGCGGGGCTGCAGATGGGCCACTTCCTGCAGGAGACGGGCCGCGATTACGTCATCCTGGAGCGGAACCACGAACCGGGCAGCTTCTTCGCCATtTACCCCCGTCATGGCCGCCTGATCAGCATCAACAAGCTGTTCACCGGCCGGCACAACCCGGAGTTTAACCTGCGCCACGACTGGAACTCCCTGCTGGGGGCGGTGCGGGGGCGGGGTCAGCCCAGGGCGCCCCTGTTCTCGCGGGTCAGCTCTGCCCTGTACCCCCCCGCCCACAGCCTGCGCCGCTACCTCTCCCTGTTCGCCCAGGAGCTGCGGCTCCGGGTGCGCTATGGCGTCGACGTGGCTGGGGTCAGCCAGGGGACTAGCCAAGGTAATGGTGAGAAGGAGTGCGACCGATTCGACCAGAGCCAGAGCTACACCCTGACTGACCAAGAGGGACTGAACTACACCTGCAGggtgctGCTGGTGGCCTCAGGGCTGTGGGAGCCCCAGCAGGTGCGCTTCCCGGGCTGGGAGGCGGTGGAGGGGTACGAGTCCCTGCCCCGGGATGGCTCCGGGTTCCAGGGCCAGGCCGTGCTCATTCTGGGCAAGGGCAACTCCGCCTTCGAGACGGCTGCAGCCCTGCTGCCCCACACCGCCCGCATCGCCCTGTACAGCCCGCGCCCCGTGCGCCTCGCCTGGCAGACGCACTATGTTGGTGACCTGAGGGCAGTGAACACAGAGCTGCTGGACACCTACCAGCTCAAGTCTCTGGACGGGCTGGTGGACGGCTCGGTGGAGCAGCTGGCGCTGGTGCGGGACGCACGGGGCCGACTGCACGTCACGCTGGCTGAGCTGCTGCGTCTGCACGGCAACGACTCTGCGGCCACGCGGGCCGCCCATCACCACGACAACTTCTCCCTGCGCCGGCCCTTCGACCGCGTTGTGCGCTGCCTGGGCTTCAGGTTCAACTCCTCCATCTTCCACAGTCGCTGTGCTCTGGCTCTAACAGTGCTGTCCCTGTCCTGCAGCTCGGCGTGCCCCAGGCGGGCGGGCGTGGCGCGGGGCCGGTTTCCGGCGCTGTCGGCCTGGTTCGAGGGGCGGGGCTTGCCTGGCCTGTTTGTGATCGGCGCCGCTGCCCACTCCCGGGACTACCGCCACTCCGCTGGCGGCTTCATCCACGGCTTCAGATACACCGTGCGTGCTGTCCACCGTATACTGGAGCAGCGGTACCACGGCCACCCCTGGCCGGCCGCCACCCTGCAGACCAGTCAGCTGCTGAGCGCCATCCTGAGGCGGGTGAATGAGGCGTCCGGACCGTACCAAATGTTTGGGATGCTGGGGGACATCATCCTGCTACAGGGGGACAGTTTCCAGTACCTGGAGGAGTTCCCTCTGCAGGCTCTAGCCCAGCTGACAGCTCTGACAGGCCGGGCAGTGGGACCAGGGGGGCTGCTGGTGCTGGTGATGGAGTATGGACACAGCCTGACCGACTCACTGGGTCAGAACCGCTCCATCACGGACTGGGCCCTGGCCTGGAAGTCCAACTTCCTGCACCCAGTCCTGTACTACTACAACACCCTGCCCAGCGAGCGGGACATGAGGCTCCGCCCCCCTGGCTGGCCATTGCCCCGCCCCCAGGCTCTGCATCACATAGTGGAGGACTTCCTGACGGAGTGGGAGGGGCCAGTGTCCCACAGCCAGCCGCTGCGCCGCTTCCTGGAGCACtgcctgacctctgacctccgcACGTTCTACGCAGTGGAGGCGGGGCTGATGGAGGACTTCCACCCCGAGCTGGCCAATGAGAGTGGAAGGACCCCGCCCTTACCCGGTCACATGACACGGACCGGGGCTCAGCTGACCAGGGTCGGTGTCAGCAGGGATGACCTCTGA

Function

GO:

id name namespace
GO:0030433 ubiquitin-dependent ERAD pathway biological_process
GO:0005788 endoplasmic reticulum lumen cellular_component
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014915 True 2085 mRNA 0.67 10 39592614 39599496

Neighbor

gene id symbol gene type direction distance location
AMCG00014910 NA coding downstream 55771 39531326 ~ 39536843 (-)
AMCG00014905 NA coding downstream 307267 39282154 ~ 39285347 (-)
AMCG00014903 NA coding downstream 322370 39263141 ~ 39270244 (-)
AMCG00014901 NA coding downstream 375516 39205047 ~ 39217098 (-)
AMCG00014902 NA coding downstream 415953 39138823 ~ 39176661 (-)
AMCG00014917 NA coding upstream 40915 39640411 ~ 39641256 (-)
AMCG00014916 NA coding upstream 49308 39648804 ~ 39657562 (-)
AMCG00014920 si:ch211-241c24.3,si:ch211-241c24.4,LOC107745955,LOC107553807 coding upstream 163074 39762570 ~ 39764640 (-)
AMCG00014924 NA coding upstream 221067 39820563 ~ 39822089 (-)
AMCG00014927 NA coding upstream 359329 39958825 ~ 39960996 (-)
G74446 NA non-coding downstream 21208 39570678 ~ 39571406 (-)
G74427 NA non-coding downstream 92937 39498703 ~ 39499677 (-)
G74414 NA non-coding downstream 115510 39463079 ~ 39477104 (-)
G74413 NA non-coding downstream 138651 39453653 ~ 39453963 (-)
G74395 NA non-coding downstream 191385 39338330 ~ 39401229 (-)
G74469 NA non-coding upstream 23858 39623354 ~ 39624793 (-)
G74501 NA non-coding upstream 100067 39699563 ~ 39702594 (-)
G74510 NA non-coding upstream 136548 39736044 ~ 39736401 (-)
G74512 NA non-coding upstream 144632 39744128 ~ 39744359 (-)
G74515 NA non-coding upstream 154199 39753695 ~ 39753938 (-)
AMCG00014914 ankrd54,LOC107563363,LOC107728844,LOC107559232,LOC107670919,LOC107719341 other downstream 956 39590496 ~ 39591658 (-)
AMCG00014906 NA other downstream 213461 39378175 ~ 39379153 (-)
G74375 myh9,LOC100380669 other downstream 332254 39258062 ~ 39260360 (-)
G74247 LOC100136012,LOC107575789 other downstream 672261 38898095 ~ 38920353 (-)
G74160 NA other downstream 948076 38597368 ~ 38644538 (-)
G74477 NA other upstream 38403 39637899 ~ 39638957 (-)
G74569 NA other upstream 301974 39901470 ~ 39983396 (-)
G74593 NA other upstream 335397 39934893 ~ 40012081 (-)
G74591 NA other upstream 345234 39944730 ~ 39951070 (-)
AMCG00014938 NA other upstream 635562 40235058 ~ 40268485 (-)

Expression


Co-expression Network