AMCG00014917


Basic Information

Item Value
gene id AMCG00014917
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39640411 ~ 39641256 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014917
ATGCGGTTCTGCCTGAGGCTCCCCCTGTTCTGcaccctcttcctctccctggccagcctgccctccccctcccccccccagcAGGCCTCTCAAGGGCCTCAGCCTCGCCCAGGAGCCCCGCCTGACTGGGACCTCTCCTTCCTGCGCTCGCGGCCGGCCTCCTCCTTATCCGCCTACTCTCTGTCCCTGGACCCCCGGGACTACCAGTACGTGCCCAAGCCCAAGCACGTGCGCCCCAGCCGGCTGCTGCGGGTCCTGGGCAGTTCCTACGACCCCTTCTGGATGTCCATCGAGAAGCCTGCACAGACGGAGAGGGCCGGGGAGGCGACCGCGGCACCCAGCGAACAGCACCCTGACGACCACGGCCCTGGCAACAACGACGACCAGAACCACTTCAACTACAGCGTGTCCCCGGAGCTGCGGGAGGGCGCGGCCCGCTACCAGCGCAAACTGGAGCAGGAGGCCCGGGACCTGGACCTGGACCTGCGCCGGCTGCCCGGCGGGGCGGCCCAGGCCGAGCTGTTCCGGGCCTGGCTGGTGGCGCAGGCGAGCTGCCAGCTGACCCACCGCTGGCTGGACCTGGGCCCCGTGTTCTGGCCCCGCTGGGTGCGCCACACGGACTGCCAGGACCCAGCCGTGGTGCCCAGCTGCTCCTTCCCCGCGGGCATGGCCTGCCGCCGCGCCCAGGTCACCCAGATCAAGATCCTGGCCTGGCACTGCTGGGGGGCCACGGCGACCGgcggggaggtgggggggcggtGCCAGTGGAGGCAGGTGCCCTACCCCGTGGTCACGGCCTGCAAGTGCTCCTGTCTGCCTGTGGACGCCTACAGGGGCCCCGTGTGA

Function

GO:

id name namespace
GO:1901607 alpha-amino acid biosynthetic process biological_process

KEGG:

id description
ko00910 Nitrogen metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014917 True 846 mRNA 0.72 1 39640411 39641256

Neighbor

gene id symbol gene type direction distance location
AMCG00014915 NA coding downstream 40915 39592614 ~ 39599496 (-)
AMCG00014910 NA coding downstream 103568 39531326 ~ 39536843 (-)
AMCG00014905 NA coding downstream 355064 39282154 ~ 39285347 (-)
AMCG00014903 NA coding downstream 370167 39263141 ~ 39270244 (-)
AMCG00014901 NA coding downstream 423313 39205047 ~ 39217098 (-)
AMCG00014916 NA coding upstream 7548 39648804 ~ 39657562 (-)
AMCG00014920 si:ch211-241c24.3,si:ch211-241c24.4,LOC107745955,LOC107553807 coding upstream 121314 39762570 ~ 39764640 (-)
AMCG00014924 NA coding upstream 179307 39820563 ~ 39822089 (-)
AMCG00014927 NA coding upstream 317569 39958825 ~ 39960996 (-)
AMCG00014930 NA coding upstream 388516 40029772 ~ 40039325 (-)
G74469 NA non-coding downstream 15618 39623354 ~ 39624793 (-)
G74446 NA non-coding downstream 69005 39570678 ~ 39571406 (-)
G74427 NA non-coding downstream 140734 39498703 ~ 39499677 (-)
G74414 NA non-coding downstream 163307 39463079 ~ 39477104 (-)
G74413 NA non-coding downstream 186448 39453653 ~ 39453963 (-)
G74501 NA non-coding upstream 58307 39699563 ~ 39702594 (-)
G74510 NA non-coding upstream 94788 39736044 ~ 39736401 (-)
G74512 NA non-coding upstream 102872 39744128 ~ 39744359 (-)
G74515 NA non-coding upstream 112439 39753695 ~ 39753938 (-)
G74597 NA non-coding upstream 321674 39962930 ~ 40005067 (-)
G74477 NA other downstream 1454 39637899 ~ 39638957 (-)
AMCG00014914 ankrd54,LOC107563363,LOC107728844,LOC107559232,LOC107670919,LOC107719341 other downstream 48753 39590496 ~ 39591658 (-)
AMCG00014906 NA other downstream 261258 39378175 ~ 39379153 (-)
G74375 myh9,LOC100380669 other downstream 380051 39258062 ~ 39260360 (-)
G74247 LOC100136012,LOC107575789 other downstream 720058 38898095 ~ 38920353 (-)
G74569 NA other upstream 260214 39901470 ~ 39983396 (-)
G74593 NA other upstream 293637 39934893 ~ 40012081 (-)
G74591 NA other upstream 303474 39944730 ~ 39951070 (-)
AMCG00014938 NA other upstream 593802 40235058 ~ 40268485 (-)
AMCG00014946 NA other upstream 639938 40281194 ~ 40294526 (-)

Expression


Co-expression Network