AMCG00014936


Basic Information

Item Value
gene id AMCG00014936
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40188709 ~ 40206799 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014936
ACAGGTGAATGATGGACGTGGCCGTGGGGGAGGAGCCTCAGAAGAAGGTGTTCCGTGCGCGCAAAACCATGCGACTCAGTGACCGATCCCAGCTGGACGCTCTGCACCGCCCCAGGCCGTCCGATGAACAAGACCCTCCTGTCGCCCCTGTGCTGCTGAACGGCAGGCACCCCGACACGAAGACCGGGCGGTCCAGCCCAGAGACCCCGGGGGGGTCCAGACCGGTCGCCCCCTCCTCACCCACCGTCttactctccctctccctgtccccctcTCGGGCAGGGGagccagaggaggaggagaaggagccGGAGGTGGCGGCACCAGACAGcagcccctccccctccttgTCTGCCGACTCTGTGAAGGAGGGAGCGGGGGGGCGAGGGATAGAAGGGAAACTGAAACAGGCGCAGGGGCCAGGGGGGTCTTCCTCCGCTCTGGCTGCCGAGGTGAAGGAAGGCCAGGACAAGGAGGAGAACAGGAGAAGGAAGCAGGACACAggcagggagaaggagagaacaGGGCCCCGCGCCCCCTCTCCCATCATTCTGCTCACACCCCTGGATGCGGAGCAGAGGAAGAGTAGCGCAGACAGACTGaaatcTTCCAAGGCAGATGCTGCCAGAACCGCAGCCGCCTCCTCATCGCCACGACGATCCCCAAATCCCCCCACCTCCGCTGCAGCTAAGGATGCCGATGAAGAGaaggggaagaggaagagacatTGCactgagagggaggaggaggaacagaAGGAGGTGGAGGGGCCTGTCGCCATGGAGACGGATGAGGATGTGGCTGTCTTGTCGTCGCCGCAGCCCTCGTCCTCGGCGACCGCGTCTGCCGTCGCAAAGGAACCTGTCCTGGACCCGTCGGGTGCCATTGCAGCCGCCTCGGTCATCCCCATCCTGGAGAGGTttgcccccccccagccccgccccctttcctcctcctcctcccctctccccagcGAGGATGGGGTGCCCTCCCCTCCTGCGACCTCTGACCCCGAGCCCATTGAGGGCTTTCTGGTgctgagtgaggaggaggagagcctgggagagaaggaggaggagggaggagttggaGAAAAGAGGGAAGGAGCAGCAGCAGAcgggggaggtggaggagtgCAGGAAGAAAAGGAGAGGATGGAGGGAAGTGAGCCTGTGgcagaggaagagaagaaggaggagaagggaggcagtagagagggagaggaagtaGAGATGGACATTGAGCTTGCCAGTGGCACAGCTGGGACTGAGGATACAGCTACTGGTACTGCTGCTGCGGCCACGCCCACCCCACCTGCCCCCTCACCTCCAGttacaacccccaccccctgcacACCCAAGGCTGCGGTGGAGCCGGCACACACCAGCGCAGAAGAGACCgcggtggagggagggagcgaaggatcaagggaggaggtgaagaGGCCCAGGGTGGCAGAGGGCTGTGGGTTCGAGGCCCAGCTGCAGGCATTGCAGAAGATGGTGTCGGAGCAGCTGATGGTGCTGCAGAACAGTGTGTTCGAGCGCGGACTGCAGGAGCTGCGTGAGCGGCTGGACCGTCTGGACTGCAGACACACCCATGAGCAGTTGCTGACCACACTGAAGGGTAAAATTTCTCGTTTGGCCAAGAGATTTGGAGCTGCTAACCAGGCGAAGGAAGACAGTCGGAAAGCTGCCGAGACCTACAGCTCTGCCCCCACAGCGGCTGTGGCCACGCCCACACCAACCCCTACGCCTAACTACCGTGCTGCCACAGTGAGGACGATACTGGAGTCCAGGCGAGCTGACCAGCCCAGCCCGTCCACCGTCACCTCCACCTCCACTGctcTCCAGCCCCTGCAGATGAAGCAGCCCGCCCCCAACACCATGGTAACACCAGTACTGTCAATCATCAGCTCCGCTGGCAGCACAGCCGTGGCAAGCACAGgcccctccttctccctctcctcctcttcctcctccaccagCACTTCCTCTCTGACCCTGAAGCCaactccctccccctcctccggGGTCACGACCCCTGTGACCTGTGTGACCCCCAGCAACCCCTCCTCCACCGTGGTGGGGCTGGGCGTGGCCGGGGGAGCAGCACCatcctcctccatctctctgcAGCCTGTGCTGATCCACGTGCCCCTGGCGGTGGGGGGCGGCGGTGTGGGGGGCAGCGGTGGCACGGGACTGGAGCTCATTCCGGTCTCCGCGGCCACAGCTGTGGCTCTGACGGCCAGCCAAACCCGTGCCAACCCTGTCAAGACCCTGGCTTCCCCCTTGTCCTCCTCCATCCCTCttaccacctcctcctcctcttcctccatccctctcacctcctcctcctccccttcccccGCCGTGCAGAAGAACGCTCAGCTCACTGTCCCTCGGGTCACCCTGTATGGGGGGGCCGCCCCTACCTCAGGGGTCACGGGGGGGTCAGCCCCCCGCCCTGCCCCCCTGCCCCTCGCCCTCCCCGTCACCCACGCCGTCGTGGGGGTGACAGCCGCCACTGCCTCCTCGCTGGCCTCCTCGGTCTCGGGGGCGTCATGCCCGGCTACAGCCAGTTTCGCCGCCTTGGTGATGGGAGGCGGGGCGTTGCCCGCGGCAACAGGAGGCTCTGGGACCGCTTCCAAAACAGATGCTCAGGTcacaaacagagctgctgaCTCCACTACTAAGCCCGCTGCCCAGGCCCGGCCCAGCGCTGCGGGGGCTGTGATCGACCTGACGGAGGATGACGACGATGTGCAAGGCGTGACGGTGCGGCCCAGTTCCCACTACGTGGGTAACGGACCCCAGCTGACTGTACACCATCGCCCCCTGCAGGACCCCCCGCCCTCCTCCACTGCCCCAGCCTCCCGCTTCCCCCACCCTGCAGCACCCCTCCCcgctcctcctccccctcccccacccgtGCCCGCCTCTTCCCTGCAGCACCCCGCCCCTCTGCCCTCCCCGCCGCCACCGCCCTCCCGCTTGCCCCCAGAGGCGGCCAGCACCTCGCCCCCCCAGCGGCCGCAGCTCAAGCTGGCCCGGGTGCCCAGCCAGAACGGCATTGTGCTGTCCTGGAGCGTCGGCGAGATGGACCGCTCCTGCGCTGCGGTGGACAGCTACCACCTGTACGCCTACCACGAGGAGCCCCCCGCCCCGGCCCCTGGCGCCGCCGCCTCGCCCTCCCCATCACAGTGGAAGAAGATCGGCGAGGTGAAGGCGCTGCCCCTGCCCATGGCCTGCACCCTCACGCAGTTCGTCTCTGGATCCAAGTACTACTTTGCGGTGCGCGCCCGAGACCTTTACGGCCGCTACGGGCCCTTCTGCGAGCCGCAGTCCACCGACGTCATCGCCAGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014936 True 3371 mRNA 0.66 11 40188709 40206799

Neighbor

gene id symbol gene type direction distance location
AMCG00014932 NA coding upstream 37202 40147423 ~ 40151507 (+)
AMCG00014931 NA coding upstream 48300 40114128 ~ 40140409 (+)
AMCG00014929 NA coding upstream 198223 39985305 ~ 39990486 (+)
AMCG00014926 LOC106607097,LOC107574926 coding upstream 289069 39888100 ~ 39899640 (+)
AMCG00014921 wbp11 coding upstream 301143 39876200 ~ 39887566 (+)
AMCG00014939 NA coding downstream 4029 40210828 ~ 40211397 (+)
AMCG00014937 NA coding downstream 13673 40220472 ~ 40224003 (+)
AMCG00014943 NA coding downstream 118023 40324822 ~ 40330925 (+)
AMCG00014941 NA coding downstream 175483 40382282 ~ 40385629 (+)
AMCG00014947 NA coding downstream 181107 40387906 ~ 40391206 (+)
G74615 NA non-coding upstream 50450 40101893 ~ 40138259 (+)
G74557 NA non-coding upstream 182055 39987502 ~ 40006654 (+)
G74521 NA non-coding upstream 348091 39796112 ~ 39840618 (+)
G74516 NA non-coding upstream 433045 39755390 ~ 39755664 (+)
G74513 NA non-coding upstream 436158 39752197 ~ 39752551 (+)
G74647 NA non-coding downstream 24818 40231617 ~ 40231881 (+)
G74649 NA non-coding downstream 25975 40232774 ~ 40233420 (+)
G74656 NA non-coding downstream 78102 40284901 ~ 40286138 (+)
G74661 NA non-coding downstream 96433 40303232 ~ 40379753 (+)
G74672 NA non-coding downstream 135796 40342595 ~ 40349838 (+)
G74643 NA other upstream 24712 40162016 ~ 40163997 (+)
G74642 NA other upstream 28131 40159901 ~ 40160578 (+)
AMCG00014928 NA other upstream 215639 39963768 ~ 39973070 (+)
AMCG00014925 NA other upstream 235431 39951188 ~ 39953278 (+)
AMCG00014923 NA other upstream 313281 39865082 ~ 39875428 (+)
AMCG00014942 NA other downstream 125188 40331987 ~ 40373870 (+)
AMCG00014940 NA other downstream 131416 40338215 ~ 40404638 (+)
AMCG00014954 NA other downstream 288112 40494911 ~ 40532273 (+)
G74803 NA other downstream 683175 40889974 ~ 40990904 (+)
G74925 NA other downstream 882976 41089775 ~ 41090612 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1112892 NA non-coding NC_048576.1 CM023230.2 76172528 ~ 76174499 (-)