AMCG00014940


Basic Information

Item Value
gene id AMCG00014940
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40338215 ~ 40404638 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014940
cggagacgcacacagacagacgcgGACAGACGGGCAGCGCGTAGTGTTTCGTGGGTGAGACTTTTCCTCCAAATCCTCGCAGTTCTCGTACTCTTTACGGTTTACATCGGGGCTGTTTGAAGTTGCCGTTATTGTGGAGTCCGGAGAGACGCTGCAGATTgtaacttttctctctccctctctctctgcggATCTCCATTTCAGAGTCTCTGAAAGTTGGTGATCAGTGTGTTGTCAGTGTTGTGGGACAAGGGAGTCTGAAAGATAGATACTGTTGTTTCCCTTCTCTGGAGGAAAGTGTgcattccctccctccctctctctctctctctctctctcctggacgTGGAAAGTGGCCGAAAACCAGTTTTGTCCACAGCTGTGCAACAGGCTGGAGTAATAGGCTACACATTGATATAACAATCGTCGTAAAAGATCTATCATTTTGCAGTCGAGGTGTGTACacttacagacagacagacacgcacagcAGCGCAGAGCAGAAACACTGCAACCGTGAGtagtGGCACCATGTTGGTCCTTCTTGCTGGAATCTTCCTCCTTCACATCCTCGTCATCGTCCTGCTGCTCATCGCCACCATTGACAATgccTGGTGGTTCACAGAGACCATGAGCACAGACTTGTGGAACCGCTGTGTGCTGGTGAATGGAGCTTGCAACTACACAGGCCTCCCCCCCAACTATCCCCAGGGTAACTGCGCTCTCACTGGGGGCAACTATGTTACCCAccactccctctgtccctgttctctgtccctgtccctatGTGTGTAGTAAcccctctgtctttctctctg
>TU93250
ggcgGGTCGCTGGCTCTATCTTGCTGGcggagacgcacacagacagacgcgGACAGACGGGCAGCGCGTAGTGTTTCGTGGtGGCACCATGTTGGTCCTTCTTGCTGGAATCTTCCTCCTTCACATCCTCGTCATCGTCCTGCTGCTCATCGCCACCATTGACAATgccTGGTGGTTCACAGAGACCATGAGCACAGACTTGTGGAACCGCTGTGTGCTGGTGAATGGAGCTTGCAACTACACAGGCCTCCCCCCCAACTATCCCCAGGAGTACCTGTGTGTAGTaacccctctgtctctctctctgtgctgtagaGTACN
>TU93251
ggcgGGTCGCTGGCTCTATCTTGCTGGcggagacgcacacagacagacgcgGACAGACGGGCAGCGCGTAGTGTTTCGTGGtGGCACCATGTTGGTCCTTCTTGCTGGAATCTTCCTCCTTCACATCCTCGTCATCGTCCTGCTGCTCATCGCCACCATTGACAATgccTGGTGGTTCACAGAGACCATGAGCACAGACTTGTGGAACCGCTGTGTGCTGGTGAATGGAGCTTGCAACTACACAGGCCTCCCCCCCAACTATCCCCAGGtgcacctccacttctaattTTACTTCCCCTTTAAAGTGTTTACAGTCAATAGTGTCACCATATGGATTCaggtttacaaaaatgtaaatggttgATTATTGAATGTTACTCTCACTTCAGTCTGATTGTAGAAA

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014940 True 818 mRNA 0.52 3 40338242 40340289
TU93250 False 321 TUCP 0.57 4 40338215 40340395
TU93251 False 403 lncRNA 0.50 4 40338215 40404638

Neighbor

gene id symbol gene type direction distance location
AMCG00014943 NA coding upstream 7290 40324822 ~ 40330925 (+)
AMCG00014937 NA coding upstream 114212 40220472 ~ 40224003 (+)
AMCG00014939 NA coding upstream 126818 40210828 ~ 40211397 (+)
AMCG00014936 NA coding upstream 131416 40188709 ~ 40206799 (+)
AMCG00014932 NA coding upstream 186708 40147423 ~ 40151507 (+)
AMCG00014948 NA coding downstream 14936 40419574 ~ 40437283 (+)
AMCG00014956 NA coding downstream 323164 40727802 ~ 40729957 (+)
AMCG00014955 NA coding downstream 341058 40745696 ~ 40759910 (+)
AMCG00014961 NA coding downstream 611230 41015868 ~ 41035772 (+)
AMCG00014960 NA coding downstream 632392 41037030 ~ 41041391 (+)
G74656 NA non-coding upstream 52077 40284901 ~ 40286138 (+)
G74649 NA non-coding upstream 104795 40232774 ~ 40233420 (+)
G74647 NA non-coding upstream 106334 40231617 ~ 40231881 (+)
G74615 NA non-coding upstream 199956 40101893 ~ 40138259 (+)
G74557 NA non-coding upstream 331561 39987502 ~ 40006654 (+)
G74690 LOC106579244,LOC101478282,LOC102307186 non-coding downstream 6243 40410881 ~ 40413637 (+)
G74768 NA non-coding downstream 84563 40489201 ~ 40491346 (+)
G74769 NA non-coding downstream 125076 40529714 ~ 40530310 (+)
G74778 NA non-coding downstream 241543 40646181 ~ 40646393 (+)
G74782 NA non-coding downstream 296781 40701419 ~ 40701849 (+)
G74643 NA other upstream 174218 40162016 ~ 40163997 (+)
G74642 NA other upstream 177637 40159901 ~ 40160578 (+)
AMCG00014928 NA other upstream 365145 39963768 ~ 39973070 (+)
AMCG00014925 NA other upstream 384937 39951188 ~ 39953278 (+)
AMCG00014923 NA other upstream 462787 39865082 ~ 39875428 (+)
AMCG00014954 NA other downstream 90273 40494911 ~ 40532273 (+)
G74803 NA other downstream 485336 40889974 ~ 40990904 (+)
G74925 NA other downstream 685137 41089775 ~ 41090612 (+)
G74952 NA other downstream 809312 41213950 ~ 41215242 (+)
AMCG00014963 kdelr3,LOC106601218,LOC108262534 other downstream 929848 41334486 ~ 41340160 (+)

Expression


Co-expression Network