AMCG00014946


Basic Information

Item Value
gene id AMCG00014946
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40281194 ~ 40294526 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014946
ATGGGCCTGACCCGCTCAGCAGtccggggggaggggggggcggtGGCAGTGGCGGTGGCGGCACCTCAGCCCAGAATTCCCTCGCTCCTCCAtgttcttcctcttcttcctcggAACGCCGGCTATTTCCACAgtcaggagggagggggagggccaGGGTCCTCTGGGTTTGTGGCAGAGACAGGAGTGGGAGGGATGGGTAGTTATAAAATGAGCCCCCACCAGCACCCTTCCCAGCTTGCCCACCCCCATGCCAAATCTCACCattacccccaccccctcagcCCCCTCTCCCTGGAGCAGGACTGGCCCGGtcgcccccccacccacaaGGAGGCGGCACTGATGTCACCGGGCTCGGGGGGGCAGCGTGcccacccccatccccacagcaacaacaccaacaaccaccaccaccaccaccacccccatgccctccctctccctcaggcCATGCGCTCACACCAGTCCACCCTGCTCCTCTCCCCCGGCTCCCAGTCGCCCCAGCTGCCCCCGCCGGCCCAGCAGGGCGGCTACTACGATGTTCTGAAACGCTGGCCCCTCGCtggcagagagggggagggcgaGGGCCGGAGGCAGCGGCACAGCCAAACGGCCTCTGCAACCCTGCCCCCGCCTCCgccacccccccctcctcagCCCTCCAAACCTGATACACAGCCCCCAGCTCCCTCCCCATCATCCTCATCCgcttcctccccctcctcttcctcctcctcctcctcttccaggGGGACTAAGATCCTGCCCCCCAGGAAAGCTCGGGGGCTGAAGCTGGAGGCCATCGTGCAGAAGATCACTTCACCTAACGTCAAGAGGGCCCCCACCCCGGCCAACCACACCGGGGCCTACCCCCCTGCCCTCGAGGAGGGCCCACACGCAGCCGAGGGCCCAGGGCCGGTGGGGCAGTACCCGCGGCTAGGGGGTGGCGGGGAGCTAAGTGGGGTGGGGAGCCTGGGACTCTCCTTCCTGGGGGAGGGTCTCTCCCTGGACGAAATCATGGCCTACAGAGGGGCTGAGGACACCGGACCCCCTCCCCCATCCGCGGTACCCTACCCCTGCGATCAGCCCGGTGGGGAGGGAACCAGGAGAGCCGGGCCGCAAATGAGGGAGCGGGGAGCAGagggggaagaggaagagggcGGTGGTGGCAACGATGGCAGGAAAAGGGAACTGGGGGGGCCTGATCTGACGCTGCTTGGGCCCTTACCGCCCCCCCAGCCCCGCCCTGCGCCACCACTGCCCCTCCACCACCCGCTCTCTTCCTCCCCATCCTCCGCGCTCTCCGACATCCAGAGGTTTGCCAACACCTACCAGCAGCTGGAGCCCCGGCGCGGTGGAGTGGGACGGGCAGGCCCAGACTCCGGAGACCAGTCCGCAGCCACCCTTCTCAGGCAGAAGCTGCAGGAAAGCGGGGGGCTCGGGCTGGGCCTGGACGACTACCCTGGGGGGTTGGACTTCGGTTCTGTTCGTGGCCAGAACCAGCACCAGACCCTCTGTGGCGCTccgccacccccccacccccagaccAACCCCAACATGAACCATAACACCAAGCCTGGAGAGAACGTCGTCCCCAAAGGTTACTTCCCCTCGGGCAAAAAGAAGGGCCGTCCTGTGGGCAGTGTCAACAAGCAGAAGAGAGCCCAGAACCAGGGCCAGGGCGCACCagtctcctcttcctcctcctgctcttcctcttcctcttcctcctcccctgCATTCCTGGCACCCCAGACCAGCTTGGCAAACAACCGGGGTGTCCAACGTAGCGGCAGGGATCCAGTGGAGGAGAATCTGTGCAGGGAAGCGACCAGCATCGCCGCTCCCACCGCCCCCACCACTCCCACTGCCCCTGCCACCCCCACCGCCCCAGCCCCCGGTCCCGGGACTCCTGCCGCTGCTGAGACACCAGCGCCACACAGCCAGCTGCCCCCCCAGTGTCAACCGGGAGAGGGCGGTCATGACCACAATGACGGAAACGACGATCGCGACTGCAAACCGCGCCGGCAGAGACAGAGGCGCAGGaagggtgggggaggggaaggCACTGAGGGAGAAGGAACGGCGAGGGCAGGAGGGAGGCAGAGAAGGAGACGCCGGGGGAGAGGAGATGCTGAAGGAGGGGACGGGGGGACGTTCTCCGAGAGAGACCTAGAGGACAGGAAGACCGAAGAGGGAGCTGTGGGGGGAGtggcagggggagggggagggggctgggcGTGGGCCGGCCCGTTCAAGTCCAGTTTCTCGCCCTACATCCACGTGGAGAAGCAGGTCCAAGAGCTGGGCGCAGTCTGCACCATCATCAACGCCATGGGTGAGGGCCACCGCGGGAAGAGCGCGGCGGGGGGAGAGGTGGCTGGGCCGGGGCAGGGGATGTCGACACAGCCGCCTGCAATGCTTTCCAGGCGCGACCGGGAACGGGACAGGGAGGGCTGCTCTGCCAAGGGAGCCTCCCTCGAGTCGGCCGCCGCCTCCGTCTCCTCCGCTGCCGTCCACTCCAGTCCCACGGCCAAAGCCCTGCCCTCCTCTGGCTACCTCCTCCCGGGACCCCCCGTCACAGACTCCGGGGTCTTGGGCCGGCTGCTGTGCTGCCTGTGCAAGAAGTGGGCCAATTACAAAACCCTGGGGGACCTTTTCGGGCCCTACTACCCCCCCCAGTACGCTGCCAGCCTCCCCAAGCACCCCCCACCAGCCAGGCAGGGGCAGGGCCAGCCCCGTGTCAGAGGCACCGgaccaggagagggagcagaggCCGGGGGGGCCGTGATCAAAGTGGAAGTGGAAGCCGCGCCCATTGTCACGCCAACGGCTGCTGGTGCAGCAGGGTGGGAGCagcaggagaagaaggaggagaaagaagaggatgaggagagagaggagggtaaGACACCTGCTCTGGCTCTAACTCCCCCCCTCAGTGCTCCACAGCCAGCACTACAGCCACAGCCCCAGCAGCCGCAGCCCTCCGGGGGCAGCAGGACCGAGGCGCACAAGCTGACCTCCCATCCCCGCTTCAAGAGACGCCACCGCTCCAGTGAGGACCCGGGCAACCCCCCGACCGCCCCGGCTGCCCCCGCCACGGAGCCTGAGCCACCCCTGCCCCTGCCCGACCTGCCCCTGGACCCCCAGGAGCTGTGGGTGCACGAGCCGTGTGTGGTGTGGACCAGCGGCGTGTTCCTGGTCAGCGGCCGGCTTTACGGCCTGCAGGAGGCGCTGGAGGGAGCCAGGGAGACGCGCTGCTCTCACTGTGACGACTCGGGCTCCACTCTGGGCTGCTACAGTAAAGGCTGCTCCCTGAGATACCACTATCTGTGTGCCATGGAGGCAGatTGCTCTCTGAATGAAGACAATTTCTCTATACGATGTCCAAAGCACAAGGCTGGCTGCAGTGCACATGGCAATGGAGAGCTGACggagtgggagagaggaggaggaggaggaggaggaggatcgAGGGCAGGACGCGCGGGCCATCACCACACCACGGGGATGGAGCGAGACAACCAGACACCACCAGGCAGGGGCGGCCCAGACGCACGACGGGACACCATTggaagctCCACGGCCGGAGCGACGGAGGCCCAACGCATCTGTGCCTTTATCTTccgcttcttcttcttcttcggcCTGATCCTGTCCGTGCGCTCGTCCTACGCCCTGGGCGGCGTGCTGCCCTGCCCCCTGCTGGTCCACGCTCTCATCTGCCTGCTCATCTTCTTTGCCATCTACCTGATCTACAACTTCCTGTACCTGTGA
>TU93314
tcctcctcctcctccccctctcatCTCCTCTCTTCAGGGCGCCGCTCTGGCGCTCGTAGACCAGGAGCCGGGGATGGAAGGATGACCAGAGGAAGGGGAGGTGGCGGGGGCGATGGAGGGGCACAGCCAGACGAGGCCCTGCGCTCTCCGCCCCCCACTCTAGGCAGCCCAGCGGGGGACAGCCAGCCCAGAGCCCGGCAGCCCAGCGGCACCAGTGCGGGGCCCAGTCCTGAGGGGCCTCAGAACCCCCTGGGGCCCCCCCAGGGAGCAGCGGGGCCCCCAAAGCGCCTCTCGTcttcccagcagcagcagcagcagcagcgcctgCCCGAGCTTTCCGACTACCccgctgcctctctctccccatcctcttcctcctcttcctcctcgtcGCCGGCTCCCACGGCTCTCCCTGTGCTCCCTCCCCCATCTCCCTCCCCCGCTGCtgctccctccatccctccccctccttcttcttcgtcctccccctctccccatctcccgAGCCCTACCTCCACCTCCTTgatccctcctcctcctcctcctcttcctgtgcCTGGCTCTGGTCATTCAGGGGGCTCGGTCCCCAGCCCTGGGGTAGGAAGCACGGAATTAGTTGGGACCAAAAtgatcgagagagagagggaggtggatgacaggaaggaagaaagagaagaggagCAGGAGATGGAGGAAGAAGTTTTAGAAGAAGACACGGGTGATGAGAAGGAAGAGGCACGGAAGGCAGAACCCACAATGCGAAGACGAAACGACCAATCAGAGTGCGACCAGCAACATGAAGTGGGCAAGGCAAAGGAGGAAGCGGCCGCTGGGAGCGCAGAGGCAGAGGTGCtgcccccccgcaGCCCTACCGGCCCCAGGGGCGACCCAGAGCCCTGCCCCCTCATACTGGGATGGAGATGTCTCGCCCACGCTCACGCTGCCTGGACACGGCCAGCCACAACGGAGAGGGGGGACCCTTGGGATACCCCCCTGGCTACTGCCCCCCAAAAGCTGGGGCCACCCACCTGCCCCGTGGCCCTCAGGGGCCCCACAGAGCTCCCTTTAATTATCCTGACATGCCCCATGCTGGGATGGGGGCGAGAAACAGCCCAGTCGgggcagagggagggggaggaggtgggggcTTGAACTTGGCCTATCAGGGGTACCACCAGCCCCACCCCAACTACAGCCCCACTGCcaggaagggggagggggaggcggCAGCAGAGCGTCAGGAGAGGCGGGGCCGAGCAGACAAgatgcagctgcagctgcagcgccagcagcagcagaaacagcCACAGCAGCAGTCAGGCCAGTGTCTACAGCAGTCGCACAGCCAGTCTGCACAGCAGCAGTTCCCCAGCCTGCTGCAGGAGGTGCTGCAGGGCTACCACCTGGACAGACGCTACgggccccccccacccaccaccaccGCTGCCCCCTCCACGCCACCATCATTGCCCCCCCCTGGCCCCGGCAAGCAGTACAGCAGTCCCCTGGACTCCCCTCTTCCTCAGTCATCGGCGTCTTCTACTTCATCCACATCTTCGTCTCCGGCGGCGTCCTGGTCCCActggggggagagaaagagtgcCGCCCCCCTGGTCCCCCCAGAGCGGCCCAAACACATCAACCTCTCTGACTACTCCCTCCCGCGCCGCCCGCCGGACCTCTCTACTGTCCAGCAGCTGCTCCTGCATGGGCCTGACCCGCTCAGCAGtccggggggaggggggggcggtGGCAGTGGCGGTGGCGGCACCTCAGCCCAGAATTCCCTCGCTCCTCCAtgttcttcctcttcttcctcggAACGCCGGTCAGTCATTTGTGACATTTCCCCTTCCTGCCACCAAGGCATGGAGAGAGGGGCAGGGTCCGGGGCAGGGGGCCCTGTACAGGGCTCTGTCATTCAGcagtctctctcttcctcctcctcttcctcttcctcactcCCACTGGAGCAGAGCAGTGttgaaagagagggggaggaagcggacagagagagaagggagggggaAGGTGTGCGGAACAGGGagagggagctggagaaggGGGCGTGTCCCGTCCCTGCTCCAACCCCTGCTCctgtcccccacccccaaccaaACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014946 True 3783 mRNA 0.67 7 40281194 40292569
TU93314 False 2121 TUCP 0.66 2 40292156 40294526

Neighbor

gene id symbol gene type direction distance location
AMCG00014934 NA coding downstream 116614 40162386 ~ 40164580 (-)
AMCG00014933 NA coding downstream 120845 40153419 ~ 40160349 (-)
AMCG00014935 NA coding downstream 173529 40085776 ~ 40107665 (-)
AMCG00014930 NA coding downstream 241869 40029772 ~ 40039325 (-)
AMCG00014927 NA coding downstream 320198 39958825 ~ 39960996 (-)
AMCG00014945 LOC107382204 coding upstream 14361 40308887 ~ 40315938 (-)
AMCG00014944 sept3,LOC106952311 coding upstream 53696 40348222 ~ 40359702 (-)
AMCG00014952 NA coding upstream 99977 40394503 ~ 40398556 (-)
AMCG00014953 zgc:158803,LOC108258445,LOC105898746,LOC105916152,LOC105012183,LOC107700834 coding upstream 116348 40410874 ~ 40416728 (-)
AMCG00014950 naga,nagab,LOC102776695 coding upstream 134856 40429382 ~ 40431042 (-)
G74625 NA non-coding downstream 142093 40101893 ~ 40139101 (-)
G74633 NA non-coding downstream 151828 40128921 ~ 40129366 (-)
G74611 NA non-coding downstream 237904 40043007 ~ 40043290 (-)
G74597 NA non-coding downstream 276127 39962930 ~ 40005067 (-)
G74515 NA non-coding downstream 527256 39753695 ~ 39753938 (-)
G74725 NA non-coding upstream 2335 40296861 ~ 40299179 (-)
G74736 NA non-coding upstream 43538 40338064 ~ 40360225 (-)
G74738 NA non-coding upstream 71434 40365960 ~ 40368045 (-)
G74845 NA non-coding upstream 140914 40435440 ~ 40435670 (-)
G74854 NA non-coding upstream 351656 40646182 ~ 40646384 (-)
AMCG00014938 NA other downstream 12709 40235058 ~ 40268485 (-)
G74593 NA other downstream 269113 39934893 ~ 40012081 (-)
G74569 NA other downstream 297798 39901470 ~ 39983396 (-)
G74591 NA other downstream 330124 39944730 ~ 39951070 (-)
G74477 NA other downstream 642237 39637899 ~ 39638957 (-)
G74726 NA other upstream 8705 40303231 ~ 40304085 (-)
AMCG00014951 poldip3 other upstream 107257 40401783 ~ 40410777 (-)
AMCG00014949 ndua6,ndufa6 other upstream 142733 40437259 ~ 40534709 (-)
G74862 NA other upstream 403327 40697853 ~ 40698276 (-)
G74870 NA other upstream 488314 40782840 ~ 40783230 (-)

Expression


Co-expression Network