AMCG00014947


Basic Information

Item Value
gene id AMCG00014947
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40387906 ~ 40391206 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014947
TGTGGATTTGAGATATTTTGGACAAGGATATtgtgattgactgactgacagacagatgtATGGAGCTGCCTACGTGACAGACTGAGCGGAGGGAGGGACGGAGGAGAGGAAGGTCAGAGGAGACGTGGGCAGGTTATAAAGGCCAGAGACGCTGCAGGAGAGCGACACATCCATTGTCCTTGAGGAACAAGAGTGCCAAACaaccacacagagagagagactcaacGCCAGGAAGACTTTTAAACAACTACAGTGACCCGGTGCAGTGATGTCTCTGAGCTCAGGCGAGTGGGATCTGGTTCTGAAGGCCTTTGGCTGTGTGAAAGCTGACGCGGCGGGGAACGGGGGTGAGGTCCTGAGACGtctgttCAAGGCTCACCCCGCCACCATCCAGCTGTTCCCCAAGTTCCGCTCGCTGTCGGAGGCAGAGATACAGGAGAGCGCGGCGGTGTCCAATCACGGCGCCACGGTGATCAACAAGTTGGGCGACCTGCTGAGTCGCCGTGGCGAGTATGGGGCGGAGCTGAAGCCCATGGCGCAGAGCCACGCCCACACCCACAAGATCCCCCTGGAGAACTTCACTctcatCAGCGAGGTGATCGTGCAGCTGATGAAGGAGAAGGTCGCAGGGTTCGGGGGCGACTCTGAGGCGGCCATGAGGAAGGCCCTGGCTGCCCTGGTAACAGACCTGCAGGGGCTATACAAGGAGCTCGGCTTCAAGGGATAAGACTCGCCCTGTATGAGCTCCCCTCCCCTTGTCCCCCTCAGAGTCCAGGCCAGGCGTTGTGGGTTTGATGTGCTGTAGCTTCAGTAGTGTATGTAGGAATGAATggaacaataaaatatactataCTCCACACAACCAACATGGTCTCTTAATTCACTCACTCCcccccttccttccttccctccatTTCTCTTGTTCTCTGCCTCTCGCTCCTGTGCCCGTTGTCAATCCATCCAGCTCTCCGCATCCGTCTGTCTGTCCAATTCTCCCTTGCTCTCCCACTCTCTGCCCCCTCACATTCTGCCACAAACAATACTTCACTCTCGGTGAGTATTCGTGCTATGATCAGGTCACCAGGCTGTTCATTGGTATAGAACATCTGAcacatgtgtgacaatagttagcattaggGTTGCAAAGAGTCAGAAACTTTCCAGGGGAAGTTAAGCCTGGGAATTTTGCCACAATGTCATCAGAAAATGTTAGCTtataatagtttttctttttgcagggGATACACATAATAAGGCAATTCTAGGTCTTGTGGCATGTTTGGGTTAAAATATCCTCATTAAATGTCACTCCAGTAGAGCTGCACCCCTCTGCTGCACAGCGCACTCCTGCATCACATGCGCAGCTGCTTCTCAGAC

Function

GO:

id name namespace
GO:0014823 response to activity biological_process
GO:0048565 digestive tract development biological_process
GO:0001570 vasculogenesis biological_process
GO:0006810 transport biological_process
GO:0001666 response to hypoxia biological_process
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K21892 MB; myoglobin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014947 True 1377 mRNA 0.53 4 40387906 40391206

Neighbor

gene id symbol gene type direction distance location
AMCG00014941 NA coding upstream 2277 40382282 ~ 40385629 (+)
AMCG00014943 NA coding upstream 56981 40324822 ~ 40330925 (+)
AMCG00014937 NA coding upstream 163903 40220472 ~ 40224003 (+)
AMCG00014939 NA coding upstream 176509 40210828 ~ 40211397 (+)
AMCG00014936 NA coding upstream 181107 40188709 ~ 40206799 (+)
AMCG00014948 NA coding downstream 28368 40419574 ~ 40437283 (+)
AMCG00014956 NA coding downstream 336596 40727802 ~ 40729957 (+)
AMCG00014955 NA coding downstream 354490 40745696 ~ 40759910 (+)
AMCG00014961 NA coding downstream 624662 41015868 ~ 41035772 (+)
AMCG00014960 NA coding downstream 645824 41037030 ~ 41041391 (+)
G74661 NA non-coding upstream 8153 40303232 ~ 40379753 (+)
G74672 NA non-coding upstream 38068 40342595 ~ 40349838 (+)
G74656 NA non-coding upstream 101768 40284901 ~ 40286138 (+)
G74649 NA non-coding upstream 154486 40232774 ~ 40233420 (+)
G74647 NA non-coding upstream 156025 40231617 ~ 40231881 (+)
G74683 NA non-coding downstream 5092 40396298 ~ 40397074 (+)
G74690 LOC106579244,LOC101478282,LOC102307186 non-coding downstream 19675 40410881 ~ 40413637 (+)
G74768 NA non-coding downstream 97995 40489201 ~ 40491346 (+)
G74769 NA non-coding downstream 138508 40529714 ~ 40530310 (+)
G74778 NA non-coding downstream 254975 40646181 ~ 40646393 (+)
AMCG00014942 NA other upstream 14036 40331987 ~ 40373870 (+)
G74643 NA other upstream 223909 40162016 ~ 40163997 (+)
G74642 NA other upstream 227328 40159901 ~ 40160578 (+)
AMCG00014928 NA other upstream 414836 39963768 ~ 39973070 (+)
AMCG00014925 NA other upstream 434628 39951188 ~ 39953278 (+)
AMCG00014954 NA other downstream 103705 40494911 ~ 40532273 (+)
G74803 NA other downstream 498768 40889974 ~ 40990904 (+)
G74925 NA other downstream 698569 41089775 ~ 41090612 (+)
G74952 NA other downstream 822744 41213950 ~ 41215242 (+)
AMCG00014963 kdelr3,LOC106601218,LOC108262534 other downstream 943280 41334486 ~ 41340160 (+)

Expression


Co-expression Network