Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014949 |
| gene name | ndua6,ndufa6 |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 40437259 ~ 40534709 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| ndufa6 | Predicted to be involved in response to oxidative stress. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 33. Orthologous to human NDUFA6 (NADH:ubiquinone oxidoreductase subunit A6). |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0070469 | respirasome | cellular_component |
| id | description |
|---|---|
| K03950 | NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014949 | True | 765 | mRNA | 0.46 | 2 | 40437259 | 40438149 |
| TU93466 | False | 676 | TUCP | 0.51 | 3 | 40437339 | 40534709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014950 | naga,nagab,LOC102776695 | coding | downstream | 6217 | 40429382 ~ 40431042 (-) |
| AMCG00014953 | zgc:158803,LOC108258445,LOC105898746,LOC105916152,LOC105012183,LOC107700834 | coding | downstream | 20531 | 40410874 ~ 40416728 (-) |
| AMCG00014952 | NA | coding | downstream | 38703 | 40394503 ~ 40398556 (-) |
| AMCG00014944 | sept3,LOC106952311 | coding | downstream | 77557 | 40348222 ~ 40359702 (-) |
| AMCG00014945 | LOC107382204 | coding | downstream | 121321 | 40308887 ~ 40315938 (-) |
| AMCG00014957 | NA | coding | upstream | 351306 | 40886015 ~ 40898700 (-) |
| AMCG00014959 | LOC107676178 | coding | upstream | 377485 | 40912194 ~ 40922866 (-) |
| AMCG00014962 | NA | coding | upstream | 454963 | 40989672 ~ 40990791 (-) |
| AMCG00014967 | NA | coding | upstream | 643175 | 41177884 ~ 41226807 (-) |
| AMCG00014972 | polr2f,LOC107727050,LOC107711805 | coding | upstream | 878703 | 41413412 ~ 41416011 (-) |
| G74845 | NA | non-coding | downstream | 1589 | 40435440 ~ 40435670 (-) |
| G74738 | NA | non-coding | downstream | 69214 | 40365960 ~ 40368045 (-) |
| G74736 | NA | non-coding | downstream | 77034 | 40338064 ~ 40360225 (-) |
| G74725 | NA | non-coding | downstream | 138080 | 40296861 ~ 40299179 (-) |
| G74625 | NA | non-coding | downstream | 298158 | 40101893 ~ 40139101 (-) |
| G74854 | NA | non-coding | upstream | 111473 | 40646182 ~ 40646384 (-) |
| G74860 | NA | non-coding | upstream | 161278 | 40695987 ~ 40696241 (-) |
| G74864 | NA | non-coding | upstream | 169202 | 40703911 ~ 40704607 (-) |
| G74875 | NA | non-coding | upstream | 286985 | 40821694 ~ 40822155 (-) |
| G74880 | NA | non-coding | upstream | 337054 | 40871763 ~ 40871994 (-) |
| AMCG00014951 | poldip3 | other | downstream | 26482 | 40401783 ~ 40410777 (-) |
| G74726 | NA | other | downstream | 133174 | 40303231 ~ 40304085 (-) |
| AMCG00014946 | NA | other | downstream | 142733 | 40281194 ~ 40294526 (-) |
| AMCG00014938 | NA | other | downstream | 168774 | 40235058 ~ 40268485 (-) |
| G74593 | NA | other | downstream | 425178 | 39934893 ~ 40012081 (-) |
| G74862 | NA | other | upstream | 163144 | 40697853 ~ 40698276 (-) |
| G74870 | NA | other | upstream | 248131 | 40782840 ~ 40783230 (-) |
| AMCG00014958 | NA | other | upstream | 371516 | 40906225 ~ 40909451 (-) |
| G74887 | NA | other | upstream | 388255 | 40922964 ~ 40925437 (-) |
| G74890 | NA | other | upstream | 397088 | 40931797 ~ 40933954 (-) |
