Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014954 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 40494911 ~ 40532273 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0070469 | respirasome | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014954 | True | 910 | mRNA | 0.45 | 3 | 40530392 | 40532273 |
| TU93363 | False | 312 | TUCP | 0.58 | 2 | 40494911 | 40530521 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014948 | NA | coding | upstream | 57628 | 40419574 ~ 40437283 (+) |
| AMCG00014947 | NA | coding | upstream | 103705 | 40387906 ~ 40391206 (+) |
| AMCG00014941 | NA | coding | upstream | 109282 | 40382282 ~ 40385629 (+) |
| AMCG00014943 | NA | coding | upstream | 163986 | 40324822 ~ 40330925 (+) |
| AMCG00014937 | NA | coding | upstream | 270908 | 40220472 ~ 40224003 (+) |
| AMCG00014956 | NA | coding | downstream | 195529 | 40727802 ~ 40729957 (+) |
| AMCG00014955 | NA | coding | downstream | 213423 | 40745696 ~ 40759910 (+) |
| AMCG00014961 | NA | coding | downstream | 483595 | 41015868 ~ 41035772 (+) |
| AMCG00014960 | NA | coding | downstream | 504757 | 41037030 ~ 41041391 (+) |
| AMCG00014966 | NA | coding | downstream | 771535 | 41303808 ~ 41312018 (+) |
| G74768 | NA | non-coding | upstream | 3565 | 40489201 ~ 40491346 (+) |
| G74690 | LOC106579244,LOC101478282,LOC102307186 | non-coding | upstream | 81274 | 40410881 ~ 40413637 (+) |
| G74683 | NA | non-coding | upstream | 97837 | 40396298 ~ 40397074 (+) |
| G74661 | NA | non-coding | upstream | 115158 | 40303232 ~ 40379753 (+) |
| G74672 | NA | non-coding | upstream | 145073 | 40342595 ~ 40349838 (+) |
| G74778 | NA | non-coding | downstream | 113908 | 40646181 ~ 40646393 (+) |
| G74782 | NA | non-coding | downstream | 169146 | 40701419 ~ 40701849 (+) |
| G74786 | NA | non-coding | downstream | 250567 | 40782840 ~ 40783230 (+) |
| G74791 | NA | non-coding | downstream | 288965 | 40821238 ~ 40821457 (+) |
| G74798 | NA | non-coding | downstream | 336614 | 40868887 ~ 40869105 (+) |
| AMCG00014940 | NA | other | upstream | 90273 | 40338215 ~ 40404638 (+) |
| AMCG00014942 | NA | other | upstream | 121041 | 40331987 ~ 40373870 (+) |
| G74643 | NA | other | upstream | 330914 | 40162016 ~ 40163997 (+) |
| G74642 | NA | other | upstream | 334333 | 40159901 ~ 40160578 (+) |
| AMCG00014928 | NA | other | upstream | 521841 | 39963768 ~ 39973070 (+) |
| G74803 | NA | other | downstream | 357701 | 40889974 ~ 40990904 (+) |
| G74925 | NA | other | downstream | 557502 | 41089775 ~ 41090612 (+) |
| G74952 | NA | other | downstream | 681677 | 41213950 ~ 41215242 (+) |
| AMCG00014963 | kdelr3,LOC106601218,LOC108262534 | other | downstream | 802213 | 41334486 ~ 41340160 (+) |
| AMCG00014968 | sox10,LOC107674484,LOC107711804,LOC107563722 | other | downstream | 861231 | 41393504 ~ 41405752 (+) |
