AMCG00014961


Basic Information

Item Value
gene id AMCG00014961
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41015868 ~ 41035772 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014961
ATGATGGCGGACGCAGAGCTGCTCTACGACAAGACGCACTACCGGCACGACCAGCGCTGGGCGGTTCGGCTCGGCTCGgatcggctcggctcggctcggctcggcccGGTCCTGTGCGTGGCGTGCGTCATCGAGATCCTGGAGGACAGCGAGGTGtcgCTGTGCAGTCAGGCCAGTCTGAGAAGCTGCCTGCCCTCCTTCATCCTGCTGGGGAGGCTGCTGGACACGGTGCCGACGGTGGCCGAGATGCTTTCTGAGATGCTGGTCGCTCATCACGGGTCCCTGCTGGAGCACGTGTGCGAGGAtaagtgGTCCCTGCTTGAGCGTGTGTGCGCGGGGCTGCTCTTCCCAGACGAGGCCCTGAAGGGGGCTGTGGTGTATGTGCTGTGCCGGCTGTGGAGCTGCCCCCCCGCCGTGGCCaggctgcccccccccctcacacacagactctgCCGGCTGCTGCTCTCCACACTGTCCCACGGACACAGCGCACAACTGCTCCTCAACTGCCTggGGTTTCTGAGGCAGTTGCTGCGCTGCAGTGAGGCTGTGTCTGTGCTGATGAGCCCCGAGCTCTGCGCCGAGTCCGACCACGACTGCAGCACCGAGCTCACGCTGCCCGGCTGCTCCCTGCCCCTCGCCCTGAAGAAGCTGTTGCTCAGTGGGGACGAGTCTCTGCAGATGGCCAGCTCTCAGTGCATGGTGGCCATACTGCAGCACTCGCCCAGCCAGTACGGCACCCAGCTCATACAGGCAGACATACCCGCCCAACTCTCCCCCAGGCAGCCGGTGGGTATCCAGCTGTTCTCCAGTGCCAGTGGCTTCAGGGAGGTGGCAGAGGCGGTGCAGCTGGGCCTCAGCATTCCCTGCCTGCAGGTGGCGACCCAGGCGGCCTGCGCTGCCTCGGCTCTGCTCAGGTGGGAGGCAGAGCCCAGCAGCCAGGCCTCCAGAGGGGGGAGGTTTCTGCTCCAGGCCCTGGTCACACTCCACACAGCCTGCAGGCTGGCGGCCCAGTGTGCCAGTGAGCCCGGTCTGCAGGACAACGCCTTCACGGCCCCGGACCGGCCGGGCGAGGAGAGCCTGGCCTCCTTCAGCCTGGGCCTGCTGCACATCTGTGACTCGGTCTGCATCCCCACGGTCACGaagCTGTGTGAGAGAGGGCTCAGCCCAGCCGTGCTGCAGGTCTTCTACGCCATCCTGAGCTGTCAGTACACCCTGACTCCCAGTATGATGCCCCAGTTCTCCACCAAACTGGGTGAGAATCCCCTCCTGAATGCTACCTGCTCTGAGTTCCTGCAGAGGATGAGTCTGTGTCTGCTGGACACCCTGGACACTGCAGAGGCCACTCAACACGacCTTGCTGACGTGTGCAGTGTGTTGAGGGCCGGTGTTCCTGGTCTGAGCGCCCGGCTGTCCGAGTGGCCGGCCCTGCTGGGAGAGGAGCCCACCCCCGGGCAGGGAGGGCTGAGGGCCACTCAGTACAGCCTGATCACGCTGCTGTGCTTGTCTCATCAGCACCATGACAGgctaGTCCCGGGGCCGGCTCTGTTCCAGGCAGTGGTGTCACTGCTGTGCTCAGTGCAGGAGCAGGGAGACCGCCCCCCCACAGGCGTGCTCAGGGCTGCTCTCTACCTGCTGGCAGTCAGCCAGGACCGGAGCCCCCACCTGGACCGGGCTCCAGTGCACAGAGTCTGCCAGGCCCTGTCTGTGTCTCCCATTGTCTCCCTGttctccccccaccccgccgTCCTGCACTTCCTGTTCCTGTACCCAGAGCTGAGTGACCGCTTCGGGCTGCCATTCCTGGAGTGCTGGCTGGCCCGCCTCCCCGAACCTGCCACCAGAACTGGGCCGCCCAAGGCCGAACCGGACCCCACCGAGACAAAACCGCCACGGCAGCCAGaaccgcagcagcagcagcagcaacacggCCCCCGTGTGACAGCGCTGCTCTCTGTGCTGGACAGCAGCCCCACTGCAGTGCTCACTGTGctgGGTGTCCTCTGTACCGGAGAGGCTCAGCTggcccacaatgcactgctggTGCTGCGGGCCTACCTGCAGGGTCACGACCGCTGCAACCccgtgacctctgacctcctgCGACCCCAGCTGCTCCAGATTCTGCAGCGTTTCGCCATTGAGAAGGAGACTCAGAGCCTGGGAGCCTCTTGTCTCCGGCTCTTGCACACGCTGCTGGACCAGGACCTGCGGTCCCCCCTGCTGTCCCCCCCGCCGTCCCCAAGCGCTCAGCGGGTCCTGGGCAGGACGGAGGCCGCGCTGCTCCCCCTGGGCTCCCACAGGGGGCGCCGTCTCCTCACCGCCCTGCACGGCCTGCTGCTGCAGaggcAGGAGCTGTTGCTCGGTGCTGCTGTGAGCTGCCTGGCCTCCCTGCTGGGCTTCCTGCACCGGAAGAGCCCCCCCACAGCCCTGCACACAGTGTCCCAGCCCTGGACGCGGTTCCTGCTCTACACCCTGCAGAGCCCCGGGGACGACAGCCTGCTGCACCCCGCCCTGCTGACGCTGCTCACACTGCTGGTACGGTATGGCAGCAGGACCGTGGTCTGGGAGCCTGATCTGGCCCAGGTGCTGCAGGCGGCAGAGAGGAGGGACGtcagggagctgggagagggtACTGCACGGGCTCTCACTGTCCTCCTGGTACAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014961 True 2667 mRNA 0.66 19 41015868 41035772

Neighbor

gene id symbol gene type direction distance location
AMCG00014955 NA coding upstream 255958 40745696 ~ 40759910 (+)
AMCG00014956 NA coding upstream 285911 40727802 ~ 40729957 (+)
AMCG00014948 NA coding upstream 578585 40419574 ~ 40437283 (+)
AMCG00014947 NA coding upstream 624662 40387906 ~ 40391206 (+)
AMCG00014941 NA coding upstream 630239 40382282 ~ 40385629 (+)
AMCG00014960 NA coding downstream 1258 41037030 ~ 41041391 (+)
AMCG00014966 NA coding downstream 268036 41303808 ~ 41312018 (+)
AMCG00014965 NA coding downstream 327385 41363157 ~ 41364542 (+)
AMCG00014969 NA coding downstream 401808 41437580 ~ 41449836 (+)
AMCG00014976 NA coding downstream 500340 41536112 ~ 41551039 (+)
G74800 NA non-coding upstream 141384 40874103 ~ 40874484 (+)
G74799 NA non-coding upstream 143855 40871762 ~ 40872013 (+)
G74798 NA non-coding upstream 146763 40868887 ~ 40869105 (+)
G74791 NA non-coding upstream 194411 40821238 ~ 40821457 (+)
G74786 NA non-coding upstream 232638 40782840 ~ 40783230 (+)
G74909 NA non-coding downstream 6292 41042064 ~ 41043557 (+)
G74942 NA non-coding downstream 132304 41168076 ~ 41168353 (+)
G74944 NA non-coding downstream 133439 41169211 ~ 41169612 (+)
G74973 NA non-coding downstream 230547 41266319 ~ 41267002 (+)
G74977 NA non-coding downstream 234155 41269927 ~ 41270468 (+)
G74803 NA other upstream 24964 40889974 ~ 40990904 (+)
AMCG00014954 NA other upstream 483595 40494911 ~ 40532273 (+)
AMCG00014940 NA other upstream 611230 40338215 ~ 40404638 (+)
AMCG00014942 NA other upstream 641998 40331987 ~ 40373870 (+)
G74643 NA other upstream 851871 40162016 ~ 40163997 (+)
G74925 NA other downstream 54003 41089775 ~ 41090612 (+)
G74952 NA other downstream 178178 41213950 ~ 41215242 (+)
AMCG00014963 kdelr3,LOC106601218,LOC108262534 other downstream 298714 41334486 ~ 41340160 (+)
AMCG00014968 sox10,LOC107674484,LOC107711804,LOC107563722 other downstream 357732 41393504 ~ 41405752 (+)
AMCG00014970 NA other downstream 382881 41418653 ~ 41422256 (+)

Expression


Co-expression Network