Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014970 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 41418653 ~ 41422256 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0021591 | ventricular system development | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0032502 | developmental process | biological_process |
| id | description |
|---|---|
| ko03050 | Proteasome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014970 | True | 797 | mRNA | 0.64 | 5 | 41418653 | 41422256 |
| TU93693 | False | 445 | TUCP | 0.67 | 4 | 41418683 | 41421316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014965 | NA | coding | upstream | 54111 | 41363157 ~ 41364542 (+) |
| AMCG00014966 | NA | coding | upstream | 106635 | 41303808 ~ 41312018 (+) |
| AMCG00014960 | NA | coding | upstream | 377262 | 41037030 ~ 41041391 (+) |
| AMCG00014961 | NA | coding | upstream | 382881 | 41015868 ~ 41035772 (+) |
| AMCG00014955 | NA | coding | upstream | 658743 | 40745696 ~ 40759910 (+) |
| AMCG00014969 | NA | coding | downstream | 15324 | 41437580 ~ 41449836 (+) |
| AMCG00014976 | NA | coding | downstream | 113856 | 41536112 ~ 41551039 (+) |
| AMCG00014979 | maff,LOC107734233,LOC107690056,LOC107554043,LOC107584105,LOC107692071,LOC107731405,LOC106589545 | coding | downstream | 244522 | 41666778 ~ 41670067 (+) |
| AMCG00014986 | NA | coding | downstream | 388915 | 41811171 ~ 41813199 (+) |
| AMCG00014995 | NA | coding | downstream | 510262 | 41932518 ~ 41934438 (+) |
| G74980 | NA | non-coding | upstream | 145555 | 41271764 ~ 41273098 (+) |
| G74977 | NA | non-coding | upstream | 148185 | 41269927 ~ 41270468 (+) |
| G74973 | NA | non-coding | upstream | 151651 | 41266319 ~ 41267002 (+) |
| G74944 | NA | non-coding | upstream | 249041 | 41169211 ~ 41169612 (+) |
| G74942 | NA | non-coding | upstream | 250300 | 41168076 ~ 41168353 (+) |
| G75049 | NA | non-coding | downstream | 27844 | 41450100 ~ 41451333 (+) |
| G75099 | NA | non-coding | downstream | 239898 | 41662154 ~ 41665444 (+) |
| G75115 | NA | non-coding | downstream | 279365 | 41701621 ~ 41785740 (+) |
| G75117 | NA | non-coding | downstream | 282192 | 41704448 ~ 41705102 (+) |
| G75140 | zmp:0000000896 | non-coding | downstream | 367205 | 41789461 ~ 41789825 (+) |
| AMCG00014968 | sox10,LOC107674484,LOC107711804,LOC107563722 | other | upstream | 12901 | 41393504 ~ 41405752 (+) |
| AMCG00014963 | kdelr3,LOC106601218,LOC108262534 | other | upstream | 78493 | 41334486 ~ 41340160 (+) |
| G74952 | NA | other | upstream | 203411 | 41213950 ~ 41215242 (+) |
| G74925 | NA | other | upstream | 328041 | 41089775 ~ 41090612 (+) |
| G74803 | NA | other | upstream | 427749 | 40889974 ~ 40990904 (+) |
| G75052 | NA | other | downstream | 30187 | 41452443 ~ 41457150 (+) |
| G75067 | NA | other | downstream | 48957 | 41471213 ~ 41482573 (+) |
| AMCG00014980 | LOC108431982 | other | downstream | 348616 | 41770872 ~ 41774135 (+) |
| AMCG00015004 | phf5a,PHF5A,LOC102780084,LOC107584099,LOC106609350 | other | downstream | 675612 | 42097868 ~ 42100480 (+) |
| AMCG00015014 | rbx1 | other | downstream | 796398 | 42218654 ~ 42228135 (+) |
