AMCG00014977


Basic Information

Item Value
gene id AMCG00014977
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41488889 ~ 41515465 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014977
ATGCAAGAAAGCAacataataaGCCTGGACCTGGGGATCTTCAAACAAGAGGAGCTGCACAGCTTCTTCACAGAAAACATGTCCGAGCTCTCCAGCACCGAGGAGCCTGATAGGCTGCTGCGCTGCCTGCGGGACTATGACATCATCACACAGGAGGAGTACGGGAAGGTGAGTAGAATGACTCAGTGGCTCGATCAAGAGGAGGCGCTGTATACTGTGCTGGACAGGCTGGGGACAGAGGAACTGCACCTGATCAAGGGCTTCTGGAGCTGCGCCTTCAAGGGCTTCATCTTAGAGTGCAATCCCACTCTGCAGCGCCTGCAGCACAGGCTGCTGGAGATGCTGGACGAAGAGAGGTCAAGAAGGACAAGAGAGGCACCAGAGAGCACAGAGgccagagaggaggagagacaggATGAGCTGCAACCAGGACCCTCCACTACAGACTCCTCACCAGAGACACTGGACAGTTCAGAGgccagggaggaggaggaggaggaggagccagGGCTCCCAACACCATCAAAGTCACTGCGGCAGAGGAAGCCCCCCCCCTCTCCACTGCAAGACTGCACCACAgGTAAGGTCGGGCGCAGGTCCAGGCTCACAGATCACTGCAGCAATGGCAGTGTGTATAGAAGAGCACAGCTGACCCCACTTATCCCTGTCACCTGTGGGGAGAAGGAGGGCATGCTGCACCCAGACGAGCTGGCTAAAGGCTCAAGAGTGAAGATCATCCTCTCAGAGGGACAGTGGTTCAGCCCTGCTGAGTTTGAGACGTTTGGAGGAAAAGGAAGCTGGAAAAAGTGGAAACTGAGTATCAGGAGTCAGGGGATATTTCTGTCTCTATTGATCAAGGGGGaggctgggaaggagagaggagttccggttcaaaggtggTGTAACTggaaggtgaggtgggccttcTGGTCTATGgagagaaacagaaagatggacagagagacCAGAGGTTGGGACTTGGGATTTTTCACTGAGGAACAGCTCCATGACTTCTTTAAGAAAGAAATAGTGGTGCTCTCCAATACCGAAGAGCCCATTAGGCTGCTGCGCTGCCTCAAGACTGATGGCATCATTACACGGGAGGAGTACAAGAAGGTGAGTGGAACGGCAGAGGGGCCCGAGCGAGAGACTGAAATGTACAATGTGCTGGACAGGCTGGAGGAACAGAAACCACACTTGATCAAAGGCTTCTGGAGCCGCGCCTTCCAGGACTCGATCCTAAAGCAGAATCCCACTCTGCAGCGCCTACAACAAGAGCTACTGCgaTACTTGCCTTCACCTGAGATGCTGGAGAGGTTGAAAGCAAGAGACGAGCAGAGAAGGGAGGAGCAGCCATCAACGTCATCAAGCTCACTTCAGCCGAGGATGTTCCCCAGCACTCCAGAGCAGGACTATACAACAGGCTATGATGAAGAATTTGAGACTCGCCCAGACAGCCCAGCTTCATCAGGGACACTGCAGAGGGTGGAGATcagtgaggaggaagaggacccAGGCCCCTCTAGACTATCAATGTTACTGCAGCCGAGGAAGACACCCCATGAGCCACCACAGGCCAGCGTGATACAAGTCAGcagtgaggaggaggacagTGCAGAGCTGGCCTCACCTATACCTGTCACCTGTGGGGAGAAGGAGGGCATGCTGCACCCAGATATCTTTGCTAAAGgAACAAGACAGATGAGCATCTTCTCAGAGGGACAGTGGTTCAGCCCCTCTGAATTTGAGATGTTTGGAGGAAAAGGAAGCAATAGAAAGTGGAAAACCAGTATCAAGCATCTGGGAAAATCATTAGAAAAAGTGATCAAGGACATACAGCCCAAGACGCCAGCAGTCGAAGAAATAAATCCACAGCTGATAAATGAGGGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014977 True 1893 mRNA 0.53 17 41488889 41515465

Neighbor

gene id symbol gene type direction distance location
AMCG00014975 dmc1 coding downstream 19337 41463594 ~ 41469552 (-)
AMCG00014973 ddx17,LOC101071115 coding downstream 28026 41452443 ~ 41460863 (-)
AMCG00014974 LOC108424764 coding downstream 53261 41421861 ~ 41435628 (-)
AMCG00014972 polr2f,LOC107727050,LOC107711805 coding downstream 72878 41413412 ~ 41416011 (-)
AMCG00014967 NA coding downstream 262082 41177884 ~ 41226807 (-)
AMCG00014984 NA coding upstream 159319 41674784 ~ 41687445 (-)
AMCG00014985 NA coding upstream 173088 41688553 ~ 41689983 (-)
AMCG00014983 csnk1e,LOC103143618,LOC101067908,LOC103468446,LOC107096663,LOC106915477 coding upstream 175412 41690877 ~ 41698688 (-)
AMCG00014982 NA coding upstream 188990 41704455 ~ 41724237 (-)
AMCG00014987 NA coding upstream 264721 41780186 ~ 41796064 (-)
G75064 NA non-coding downstream 37556 41450090 ~ 41451333 (-)
G75035 NA non-coding downstream 79277 41406917 ~ 41409612 (-)
G75032 sox10,LOC106607141,LOC106601158,LOC107104518 non-coding downstream 83090 41405462 ~ 41405799 (-)
G74978 NA non-coding downstream 218706 41269927 ~ 41270183 (-)
G74970 NA non-coding downstream 224982 41262768 ~ 41263907 (-)
G75145 NA non-coding upstream 135871 41651336 ~ 41673042 (-)
G75144 NA non-coding upstream 154691 41670156 ~ 41672310 (-)
G75170 NA non-coding upstream 296868 41812333 ~ 41815261 (-)
G75241 NA non-coding upstream 462290 41977755 ~ 41991977 (-)
G75247 NA non-coding upstream 478098 41993563 ~ 42022081 (-)
AMCG00014971 NA other downstream 14408 41470294 ~ 41474481 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 157119 41329313 ~ 41331770 (-)
G74945 NA other downstream 319338 41169041 ~ 41169551 (-)
G74890 NA other downstream 554935 40931797 ~ 40933954 (-)
G74887 NA other downstream 563452 40922964 ~ 40925437 (-)
AMCG00014978 NA other upstream 22821 41538286 ~ 41561967 (-)
AMCG00014981 NA other upstream 240141 41755606 ~ 41766826 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other upstream 544825 42060290 ~ 42063901 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 603822 42119287 ~ 42131232 (-)
G75370 NA other upstream 776456 42291921 ~ 42292295 (-)

Expression


Co-expression Network