AMCG00014984


Basic Information

Item Value
gene id AMCG00014984
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41674784 ~ 41687445 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014984
aTGCCTCTGTATGAATCAgtgaTGAACAGTCTGTGGAGGCGTGATGTCCCCCTGTCCGAGCGGCTGGCGGACGCCCCCCCCGCGGGCCCCCTGGCCCCCGGCGCTCCGCCCACGCTGCCCCCCGCAGGGCCCAACATCTCCTGGCTGCCTGAGGCACCATTGGTTTTGCCCGACGCACCCATCTTCCTGATGACCACGACCGCCCAGGCGCTGTCTGGCTTCTTTGTCTGGACCGCCCTGCTCATCACCTGCCACCAGATCTACATGCACCTTCGTTACTACAGCTCCCCTAACGAGCAGCGGCACATCGTGAGGATCCTGTTCATCGTGCCCATCTATGCCTTCGACTCCTGGCTGAGCCTGCTGTTCTTCACCAACGACCAGTACTATGTGTACTTCGACACGGTGCGGGACTGCTATGAGGcgTTTGTAATCTATAATTTCCTCAGCCTGTGCTATGAGTACCTGGGAGGCGAGAGCTCCATCATGTCAGAGATCCGGGGCAAGCCCATCGAtgtggcCAGCGGCTACCTGTACGTGACGATTGTGTACAACATTTCGGTCAGCCTGTCTCTGTATGCGCTCTTCCTGTTCTACTTCGCGACACGGGAGCTCCTGAGCCCCTACAGCCCGGTGCTCAAGTTCTTCATGGTCAAATCAGtcatcttcctctccttctgGCAGGGCATGCTGCTGGCCATCCTGGAGAAGTGCGGTGCCATCCCCCAGATCAGCTCGGCCGAAGTGTCGGTGGGCGAGGGCACAGTTGCCGCGGGATACCAGAACTTCATCATCTGCGTGGAGATGTTCTTCGCAGCGCTAGCCCTGCGCCACGCCTTCACCTACACTGTGTACATGGACAAGAGGCTGGACTGCCAGGGCCGCTGTGCCCCGATGAAGAGCATCTCCAGCAGCCTGAAGGAGACGATGAACCCAGGGGACATGGTCCAGGACGCCATCCACAACTTCTCCCCGGCCTACCAGCAGTACACCCAGCAGTCCACGCTGGACCCCCGTCCCCACGGGCCCCCCGTGTCCCGCTCCCATAGCGGCCTGACCCCCCGTGACGCTGAGAAGACCCTGCTGCTCAGCTCTGACGACGAGTTCTGAGGCGGGGGGAGAGGTGTACGATGCTGCACGCTAGCCAGGGCCGTCGCACTACAGTAGAGTTCAACACATGACACTGCACTAGTACATTACCCCACACTAGAGCACCGCACAGCTCACTACACTGCCCACAGCACACTGAGTACAGCACACTATACTGcacagagatagagacagagaaacacacagtacagctgcagagagagtgcagaccagacagacagacgcataGCAGGGCTGCAGAGACGCCTACACGCAAACTACACTACACAGACGACATACtcgcactacacacacacttgcattcATCTCAGCTGACAAAACTATAgctacacatttttatatgattAGTTTCTCATCTGCGCCATCAGCTGACTTCCTTACCAAACCGTTGCCAAATAGGACGGCAGAAATCCCTCCCTCCTGAAGGACCCCGGCTACTCTGGTTATTATATTTTGCGTTGGGAGGAGGGAGGACTGTTAAGTGCTCAAAAATATGCTGTACGCTTCATAGCCACagattgcattcatttaaataggAATTAGCATTTTTTACTATTAGGTTTTGGCATTCTGTACTGgtaggggtggtggggggggcacagGCAGCAGAAATTCTCATTTATTTGCCCTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014984 True 1747 mRNA 0.56 7 41674784 41687445

Neighbor

gene id symbol gene type direction distance location
AMCG00014977 NA coding downstream 159319 41488889 ~ 41515465 (-)
AMCG00014975 dmc1 coding downstream 205232 41463594 ~ 41469552 (-)
AMCG00014973 ddx17,LOC101071115 coding downstream 213921 41452443 ~ 41460863 (-)
AMCG00014974 LOC108424764 coding downstream 239156 41421861 ~ 41435628 (-)
AMCG00014972 polr2f,LOC107727050,LOC107711805 coding downstream 258773 41413412 ~ 41416011 (-)
AMCG00014985 NA coding upstream 1108 41688553 ~ 41689983 (-)
AMCG00014983 csnk1e,LOC103143618,LOC101067908,LOC103468446,LOC107096663,LOC106915477 coding upstream 3432 41690877 ~ 41698688 (-)
AMCG00014982 NA coding upstream 17010 41704455 ~ 41724237 (-)
AMCG00014987 NA coding upstream 92741 41780186 ~ 41796064 (-)
AMCG00014994 NA coding upstream 128292 41815737 ~ 41822547 (-)
G75145 NA non-coding downstream 1742 41651336 ~ 41673042 (-)
G75144 NA non-coding downstream 2474 41670156 ~ 41672310 (-)
G75064 NA non-coding downstream 223451 41450090 ~ 41451333 (-)
G75035 NA non-coding downstream 265172 41406917 ~ 41409612 (-)
G75032 sox10,LOC106607141,LOC106601158,LOC107104518 non-coding downstream 268985 41405462 ~ 41405799 (-)
G75170 NA non-coding upstream 124888 41812333 ~ 41815261 (-)
G75241 NA non-coding upstream 290310 41977755 ~ 41991977 (-)
G75247 NA non-coding upstream 306118 41993563 ~ 42022081 (-)
G75333 NA non-coding upstream 480079 42167524 ~ 42167876 (-)
G75364 NA non-coding upstream 598849 42286294 ~ 42286584 (-)
AMCG00014978 NA other downstream 112817 41538286 ~ 41561967 (-)
AMCG00014971 NA other downstream 200303 41470294 ~ 41474481 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 343014 41329313 ~ 41331770 (-)
G74945 NA other downstream 505233 41169041 ~ 41169551 (-)
G74890 NA other downstream 740830 40931797 ~ 40933954 (-)
AMCG00014981 NA other upstream 68161 41755606 ~ 41766826 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other upstream 372845 42060290 ~ 42063901 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 431842 42119287 ~ 42131232 (-)
G75370 NA other upstream 604476 42291921 ~ 42292295 (-)
AMCG00015023 NA other upstream 633651 42321096 ~ 42325005 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025988 tmem184bb coding NC_007114.7 CM002887.2 3313950 ~ 3328097 (-)