AMCG00015008


Basic Information

Item Value
gene id AMCG00015008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42063997 ~ 42070963 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015008
GTTACTTTGTGCGTCTCGATACTCTCTTCAGTCATATCAGACTTTGTCACCTCCTGTCTCCTTCacttctctccgtctctctctgttCTTCTCTTGTTCCATCTTTCTCTCCCCTTACCactcttcttttctctctcttgctcttttgtctctgtatttacCTCACCTCCTCACCTTCTCCTGTCTCCATATCCCTGTTTGTTCTTCTGTCTTTCACTGTCTCTCCCACTGAGCCCTCTCATTCCCGCATCTCTTTCTAGAGCTCCCTCCCTCAGTGTGAGGATGTTCCTGGTGGTGGAGATGGTGGACACAGTGAGGATCCCTCCCTGGCAGTTCCAGCGCCAACTGAACGATGCCATCTCTGAGGAGCTGAACAAAAAACTTGCCAACAAgGTGGTGTACAATGTgggcctGTACGTGGTTTTCCGGCCCTTCCTGGACGAGATTCTGATCGGGAAGATAAAGTACTGCAGCCAGGAGGGGGTGTGGCTGTGGGAGTACGAGACGGATGAAGGCGCCCACGACCTCTACATGGACCAGAGCGAGGAGATCCGCTTCCGGGTTGTGGATGAGGCCTTCGTAGACACCTCCCCCAGTGGCCCCGTCTCTGCAACACCTGATGCCCCAGGAACTGCTGTTGCTGATGACAACAGCCAGAAGAAAGAGGCGCCCTACACACTGATAGGGTCCATCAGTGAGCCAGGCCTGGGTCTCCTGTCTTGGTGGAGCAGCAGCTAGCAGAGAAGACAGAAACTGAGAAACAGACCTACAGACCCTGCAGTAGATCTTAATCATCTTCCTGACTGTCATTAACCTGAGTTAGccagtgcagcacagcacagcacagacactggaatacctgtgtgtgtgtatctatctcTCAGTCTGTCAGTGGGGATCTGTGTTCACCCAGGAACCCAGGACTCTGGCCTGAGATGCTccactatatatgtgtgtggttAGGAGAGGTACACTATCACCCTCTATTGTccagatggaaaacaaatgccaaCTGCACAGAAATGTCTCTGACCTTGACAGGAATTTCCAATTTggtttaattgtgattttttttattttgccaaatgagttttatttttgtatgacaaataatgtattattattatgtttgttttgacagatagagattaaaaacaattaagtacATTAACtagtcaatacaaatatttaatgtaaccCTATTGTACTCTAACAGGCACTGGGCACAAGGGTCAAGATGATATTATTGTGACTCCCAGCTGGCTCAGCTGGTACCCACAGGAGACTGGGGCCTATAGACTCACAGTCATTTGTAGTGCAGTGCATTGCTTTGGCTTATTAGCAGTGCACCCGTGTGGACGCCTTTTAAAATAGTTGTTTTCTTCAGAGACGGACAAAGCTGGGTCAGACACAGTGTTAATATTTGTGgagtgtggtggggggggtgtataGATTGGACTGTCTCTGGACCCTCCCTGTATATATGTGTCAccccttaaaataaatacaccgtTACATTATTGACAAGTTGTTTTTTACACCAGTAAACTGTCACCAGTGTGGAAACTGCATGAATGCTGTAGTGATAGTGTTCTGGTATTGGACCCATCTCACATTAGACTGCAACCCAGACGTTTAAATTGATTCAAGATGATGTAGTAgtgttagtagtagtaatcaTGATTCACATAACTTAAC

Function

GO: NA

KEGG:

id description
K03022 RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015008 True 1698 mRNA 0.46 5 42063997 42070963

Neighbor

gene id symbol gene type direction distance location
AMCG00015001 NA coding downstream 25797 42023102 ~ 42038200 (-)
AMCG00014990 NA coding downstream 75290 41985975 ~ 41988707 (-)
AMCG00014989 NA coding downstream 81198 41979321 ~ 41982799 (-)
AMCG00014991 NA coding downstream 95285 41966064 ~ 41968712 (-)
AMCG00014992 LOC107591697,LOC107720054,LOC102309547 coding downstream 214228 41845859 ~ 41849769 (-)
AMCG00015007 aco2,LOC107554054,LOC107692062,LOC107584097,LOC107734200,LOC107731401,LOC103370792 coding upstream 12081 42083044 ~ 42097284 (-)
AMCG00015006 tef,LOC101073097 coding upstream 35934 42106897 ~ 42112141 (-)
AMCG00015012 NA coding upstream 50700 42121663 ~ 42123872 (-)
AMCG00015011 NA coding upstream 59082 42130045 ~ 42134449 (-)
AMCG00015009 NA coding upstream 63950 42134913 ~ 42147238 (-)
G75247 NA non-coding downstream 41916 41993563 ~ 42022081 (-)
G75241 NA non-coding downstream 72020 41977755 ~ 41991977 (-)
G75170 NA non-coding downstream 248736 41812333 ~ 41815261 (-)
G75145 NA non-coding downstream 390955 41651336 ~ 41673042 (-)
G75333 NA non-coding upstream 96561 42167524 ~ 42167876 (-)
G75364 NA non-coding upstream 215331 42286294 ~ 42286584 (-)
G75365 NA non-coding upstream 215695 42286658 ~ 42286893 (-)
G75367 NA non-coding upstream 218226 42289189 ~ 42289415 (-)
G75368 NA non-coding upstream 218627 42289590 ~ 42289858 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other downstream 96 42060290 ~ 42063901 (-)
AMCG00014981 NA other downstream 297171 41755606 ~ 41766826 (-)
AMCG00014978 NA other downstream 502030 41538286 ~ 41561967 (-)
AMCG00014971 NA other downstream 589516 41470294 ~ 41474481 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 732227 41329313 ~ 41331770 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 48324 42119287 ~ 42131232 (-)
G75370 NA other upstream 220958 42291921 ~ 42292295 (-)
AMCG00015023 NA other upstream 250133 42321096 ~ 42325005 (-)
AMCG00015031 NA other upstream 437906 42508869 ~ 42521901 (-)
AMCG00015028 NA other upstream 452369 42523332 ~ 42534278 (-)

Expression


Co-expression Network