AMCG00015009


Basic Information

Item Value
gene id AMCG00015009
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42134913 ~ 42147238 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015009
AGACAGATCAACAAGCACGCATACGTACACAGATGAAAGGACAGACAGAGGCAGGGGAAAGGCAGGTTGCATGCATAcaatatacagacagacaggggagGGACCTGGCGAAGGACCCCGTGTGGCCGAGCGAGGCGGTCTAAACTTGAAGCCAACGGGTAGAGAACTGAAAGTGAAATCTTTCCACATGCTTCCCTCCATGCAGCGAGAGTGGCCTACAGCCTGGCGACCCGCACACCCCACTATGAATCTGGACTAATCGCAATAGTAAAGcaccaacagcagcagcagtccgGAAACAACACAGCGCCGCGGCAGACAGATCTGTGTCCCTCGATATAGACAAGACTGTACTGTGTCAGGACTCGGGTGGGCGGCGGAGAGgggcatttatttttggaaacgACATGGATGTGGACAGACAGAGACGGCGGGAGGAGATTCAGAAAGCCCTGGGCTTCATACAgtttggagtgttaGCGTTTCTGACACAGCTGGTGTGTAACCTGCTGGACGAGGGGAACTGTGTGTACCGTGAGGGGGGCCTGCGGCAGGCGGTGGTGCACTACACCGAGGGCCTGAGCGTAGGGCAGTATGCTCGCACCGAGAACTTGCCCATCAACCCCGAGCTGCTCGAGTGCCTCTACGTGAACAGAGCTGCTGCACTCTATCACACTGGGGACTACACGCGCGCCCTGGAGGACTGTGACAGTGCACTGGCGCTGGGTGAGGGGGAGGGCAGCCGCCGGGCGCTGTACAGGAAGTGCCTGTGCCTGCAGGAGCTGGGCCGACTCCGAGAGGCCTACGACTGTGGTACCAGCTGCCTGCTCACCGCACCTCAGGACAGACAGGTAGTAGAACTGGCCCAGGAGCTGGCCAACAAGTTGGGCCTGAAGTTCCGCAAGGCCTACATCAGCCCCCAGAATGACTCAGGGACATCTGGAGGGGAGAGTAATGGAGAAACTGCACCCTCTAGTGAAGAGTGTATTCCCGCCCCCTTGGCCACACCTATCCCTGTGAGTGGCGATGATCCCTTGGCGACCCCTGATGACCTCAGCGTGACCTCTAACCTCCAGGGTCACGGGGGATCAGGGGGTGCCCAGGCCCGGGTGCCCTACTCTGTGCCAGAGACTGTGGATGACGTGCCGGACTGTGAGGTCATTGGCGACGAGATCGACACCTTATTAGACTGCATCCCCAAGGGGGCAGAAATGAGCATGCCTGCAGTACAGGGTGCCATCCCTACCAACATGCCAACCCGGATGTTGCCCCCCTACCCCCCTGCCGGTCCCAGCATGCCCCCACCCTCACCCAAACTGCCCTCGGCCTTCTTCGGCACGACGGTGGGCCAGCTCAACACGCTGGACTCCTTTGCTGGCCTGGCAGCTGGCGATGCCCCACCCCATGGCCCTCCCCAGGAGGCCCTGGATGTCTTGGACTCCTTCTgcccctccttctcctctgctgctgctgcttcccTGGTTGGGGTGGGGCAGGTAGGGGCTGTGGTCGGTGGAGGTGGGCTGGACTCGCTGTCTGAGTTCACACTGCCAGGAGGCAGAGTGACTCACAACCTGATCCCAGGCCTGAGGACACCTACTCACACTAATGGCCCaggctcttctctctctctgctgtcaaGGAACCCCCTGCTGGCCACACATGAGTTCAGACAGGCCTGTCCAGCCTGCTACAGCCGCATAGGTCCAAAGGTGATGGATTACCAATACCAGCCGGAGGCGGCACACCGTTGTAAGCGTGATGTGTTGCTTTGCCGACTGAAGGGGGCAGAGGACCCCACCTGGAAGCGGATCAGGCCCCGCCCCGCCCGCACTAACTTCCTGGGAGCCTTCGTGCTGTGCAAGGaGGTGCAGGAGCGGCAGGAGTGCAAGTACGGGGAGAACTGCACCTTCGCGTACTGCCAAGAGGAGATCGATGTGTGGACGCAGGAGCGCAAGGGTGCGCTGAGCCGTGAGCTGCTGTTCGACCCGCTGGCCAGCACAGAGCGCCGGGCGCTGAGCGTCACACggctgctgcagctgcacatGGGCATGTTCATGTTCCTCTGTGAGGTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015009 True 2078 mRNA 0.60 13 42134913 42147238

Neighbor

gene id symbol gene type direction distance location
AMCG00015011 NA coding downstream 464 42130045 ~ 42134449 (-)
AMCG00015012 NA coding downstream 11041 42121663 ~ 42123872 (-)
AMCG00015006 tef,LOC101073097 coding downstream 22772 42106897 ~ 42112141 (-)
AMCG00015007 aco2,LOC107554054,LOC107692062,LOC107584097,LOC107734200,LOC107731401,LOC103370792 coding downstream 37629 42083044 ~ 42097284 (-)
AMCG00015008 NA coding downstream 63950 42063997 ~ 42070963 (-)
AMCG00015017 NA coding upstream 36450 42183688 ~ 42196495 (-)
AMCG00015016 NA coding upstream 49259 42196497 ~ 42213025 (-)
AMCG00015015 f10a1,st13,LOC106607171 coding upstream 79660 42226898 ~ 42234065 (-)
AMCG00015020 NA coding upstream 162485 42309723 ~ 42313025 (-)
AMCG00015022 josd1,LOC107660868,LOC106589528 coding upstream 171556 42318794 ~ 42321081 (-)
G75247 NA non-coding downstream 112832 41993563 ~ 42022081 (-)
G75241 NA non-coding downstream 142936 41977755 ~ 41991977 (-)
G75170 NA non-coding downstream 319652 41812333 ~ 41815261 (-)
G75145 NA non-coding downstream 461871 41651336 ~ 41673042 (-)
G75333 NA non-coding upstream 20286 42167524 ~ 42167876 (-)
G75364 NA non-coding upstream 139056 42286294 ~ 42286584 (-)
G75365 NA non-coding upstream 139420 42286658 ~ 42286893 (-)
G75367 NA non-coding upstream 141951 42289189 ~ 42289415 (-)
G75368 NA non-coding upstream 142352 42289590 ~ 42289858 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other downstream 3681 42119287 ~ 42131232 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other downstream 71012 42060290 ~ 42063901 (-)
AMCG00014981 NA other downstream 368087 41755606 ~ 41766826 (-)
AMCG00014978 NA other downstream 572946 41538286 ~ 41561967 (-)
AMCG00014971 NA other downstream 660432 41470294 ~ 41474481 (-)
G75370 NA other upstream 144683 42291921 ~ 42292295 (-)
AMCG00015023 NA other upstream 173858 42321096 ~ 42325005 (-)
AMCG00015031 NA other upstream 361631 42508869 ~ 42521901 (-)
AMCG00015028 NA other upstream 376094 42523332 ~ 42534278 (-)
AMCG00015035 NA other upstream 409391 42556629 ~ 42589623 (-)

Expression


Co-expression Network