Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015011 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 42130045 ~ 42134449 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko00310 | Lysine degradation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015011 | True | 807 | mRNA | 0.60 | 7 | 42130045 | 42134449 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015012 | NA | coding | downstream | 6173 | 42121663 ~ 42123872 (-) |
| AMCG00015006 | tef,LOC101073097 | coding | downstream | 17904 | 42106897 ~ 42112141 (-) |
| AMCG00015007 | aco2,LOC107554054,LOC107692062,LOC107584097,LOC107734200,LOC107731401,LOC103370792 | coding | downstream | 32761 | 42083044 ~ 42097284 (-) |
| AMCG00015008 | NA | coding | downstream | 59082 | 42063997 ~ 42070963 (-) |
| AMCG00015001 | NA | coding | downstream | 91845 | 42023102 ~ 42038200 (-) |
| AMCG00015009 | NA | coding | upstream | 464 | 42134913 ~ 42147238 (-) |
| AMCG00015017 | NA | coding | upstream | 49239 | 42183688 ~ 42196495 (-) |
| AMCG00015016 | NA | coding | upstream | 62048 | 42196497 ~ 42213025 (-) |
| AMCG00015015 | f10a1,st13,LOC106607171 | coding | upstream | 92449 | 42226898 ~ 42234065 (-) |
| AMCG00015020 | NA | coding | upstream | 175274 | 42309723 ~ 42313025 (-) |
| G75247 | NA | non-coding | downstream | 107964 | 41993563 ~ 42022081 (-) |
| G75241 | NA | non-coding | downstream | 138068 | 41977755 ~ 41991977 (-) |
| G75170 | NA | non-coding | downstream | 314784 | 41812333 ~ 41815261 (-) |
| G75145 | NA | non-coding | downstream | 457003 | 41651336 ~ 41673042 (-) |
| G75333 | NA | non-coding | upstream | 33075 | 42167524 ~ 42167876 (-) |
| G75364 | NA | non-coding | upstream | 151845 | 42286294 ~ 42286584 (-) |
| G75365 | NA | non-coding | upstream | 152209 | 42286658 ~ 42286893 (-) |
| G75367 | NA | non-coding | upstream | 154740 | 42289189 ~ 42289415 (-) |
| G75368 | NA | non-coding | upstream | 155141 | 42289590 ~ 42289858 (-) |
| AMCG00015010 | csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 | other | downstream | 66144 | 42060290 ~ 42063901 (-) |
| AMCG00014981 | NA | other | downstream | 363219 | 41755606 ~ 41766826 (-) |
| AMCG00014978 | NA | other | downstream | 568078 | 41538286 ~ 41561967 (-) |
| AMCG00014971 | NA | other | downstream | 655564 | 41470294 ~ 41474481 (-) |
| AMCG00014964 | kdelr3,LOC108262534,LOC107679478,LOC106607138 | other | downstream | 798275 | 41329313 ~ 41331770 (-) |
| G75370 | NA | other | upstream | 157472 | 42291921 ~ 42292295 (-) |
| AMCG00015023 | NA | other | upstream | 186647 | 42321096 ~ 42325005 (-) |
| AMCG00015031 | NA | other | upstream | 374420 | 42508869 ~ 42521901 (-) |
| AMCG00015028 | NA | other | upstream | 388883 | 42523332 ~ 42534278 (-) |
| AMCG00015035 | NA | other | upstream | 422180 | 42556629 ~ 42589623 (-) |
