AMCG00015028


Basic Information

Item Value
gene id AMCG00015028
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42523332 ~ 42534278 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015028
GAATTCTCCCCCCAGGCAATCGTGCAGCTGATCCAGGCGGTGGGCCGGCGCTGGGAGCAGTACAGCACTCGGGAGCGGGGGCGGCTGTTCCAGGGCGTCCAAGAGGAGCTGGCCCAAAACGGCCAGGCCTTCCCCCTCGAGCGCATCCGCCGCAAGTGGAACAACCTGCTGGTCACCTACAAGAGGGTGCATGAGCGCGCACGCTACACCGGCCAGCACAAGACCACCTGGGACTCCTCGAAATCCACGGCAACCACCACCTCCATGGCAACCACCAGCAACATAGCCCTCTCCCTGGCTGCCTCCCTCCTGTCCctgccctccctcctccccaccctcccctcctcccctctctctccgcctcccccaccaccttcctcctccaccaacCCAGACCCCCCAAACCCAGCCCCCCAGCCTTCGGCCTTGACCTCACCCCCCCGTCAAGAGGGCCCCAGCTCCCTCCCCCGTCCCCGCCGCCTGGCCCCCCGCAAGCTGAAGCAGCCGGCAGTCGACACGGCGGAGCAGCACACCGGGCTGCTGCAGGCCTTTCTGGTGGCCCAGGAGGAGCAAGGGAAGGTGGAGGAGGAGTGGCGGCGGCGGGAGGAGGAGCGGGAGCGACGGAGGGAGCGGCGGGAGCGGCGAGCGCTGGGCACACTGGGCCGGCTGGTCACCACGCTGGAGCTGCTCTCCTCCAAGCAGGACACCGCCATTGCCCTGCTGCAGCGGCTGGCCGACCGGCACTGA
>TU94191
gttcttttccTGCTCAGGTCCAGTGGAGACTGTGGCTGCCACTCTGCAGGGGGGGTCAGGGACAGGGGAGGGGGGCACCCCCAAACTACTGATGTTGCCCCAGCCAGCGCAAGACACAGGCCCAGGCCAGGAATTCTCCCCCCAGGCAATCGTGCAGCTGATCCAGGCGGTGGGCCGGCGCTGGGAGCAGTACAGCACTCGGGAGCGGGGGCGGCTGTTCCAGGGCGTCCAAGAGGAGCTGGCCCAAAACGGCCAGGCCTTCCCCCTCGAGCGCATCCGCCGCAAGTGGAACAACCTGCTGGTCACCTACAAGAGGGTGCATGAGCGCGCACGCTACACCGGCCAGCACAAGACCACCTGGGAGTACTACGAGATGATGGACGCTTTGCTGAGCAGCTCCTCGAAATCCACGGCAACCACCACCTCCATGGCAACCACCAGCAACATAGCCCTCTCCCTGGCTGCCTCCCTCCTGTCCctgccctccctcctccccaccctcccctcctcccctctctctccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015028 True 747 mRNA 0.70 2 42523332 42524741
TU94191 False 523 TUCP 0.65 3 42523719 42534278

Neighbor

gene id symbol gene type direction distance location
AMCG00015027 NA coding downstream 85194 42433141 ~ 42438138 (-)
AMCG00015026 NA coding downstream 94557 42404338 ~ 42428775 (-)
AMCG00015024 LOC100535636,LOC107583263,LOC107748786,LOC105013407 coding downstream 134200 42388317 ~ 42389132 (-)
AMCG00015025 NA coding downstream 168817 42353501 ~ 42354515 (-)
AMCG00015021 NA coding downstream 190682 42326180 ~ 42332650 (-)
AMCG00015029 NA coding upstream 8309 42542587 ~ 42552560 (-)
AMCG00015036 NA coding upstream 63659 42597937 ~ 42611607 (-)
AMCG00015034 cuta,LOC105031189,LOC106564431,LOC106590866 coding upstream 101748 42636026 ~ 42638867 (-)
AMCG00015040 NA coding upstream 116667 42650945 ~ 42656759 (-)
G75406 NA non-coding downstream 31408 42491710 ~ 42491924 (-)
G75403 NA non-coding downstream 35614 42477008 ~ 42487718 (-)
G75384 NA non-coding downstream 176551 42345650 ~ 42346781 (-)
G75374 ep300,LOC102213167 non-coding downstream 223835 42299215 ~ 42299497 (-)
G75373 NA non-coding downstream 224190 42298917 ~ 42299142 (-)
G75466 NA non-coding upstream 105028 42639306 ~ 42640881 (-)
G75467 eif3d non-coding upstream 107206 42641484 ~ 42646678 (-)
G75468 NA non-coding upstream 109475 42643753 ~ 42645711 (-)
G75472 NA non-coding upstream 170886 42705164 ~ 42705391 (-)
G75507 NA non-coding upstream 285755 42820033 ~ 42820232 (-)
AMCG00015031 NA other downstream 1431 42508869 ~ 42521901 (-)
AMCG00015023 NA other downstream 198327 42321096 ~ 42325005 (-)
G75370 NA other downstream 231037 42291921 ~ 42292295 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other downstream 392100 42119287 ~ 42131232 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other downstream 459431 42060290 ~ 42063901 (-)
AMCG00015035 NA other upstream 22351 42556629 ~ 42589623 (-)
G75497 NA other upstream 265873 42800151 ~ 42803287 (-)

Expression


Co-expression Network