AMCG00015032


Basic Information

Item Value
gene id AMCG00015032
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42627133 ~ 42629493 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015032
ATGGCGAGCTCGGTGGAGATAGTCAGCCCTTATCTCTTTCGCTACAAAGGCTATAACTTCGCGCACGGAGAGACCACCCCGGAGTACATCGACTCGCTGCAGGACTTCGAGATCCGCGACAGCGACGTGTTCCTCGTCACCTACCCCAAGTCCGGCACAGTATGGACCCAACAGATCATCACCCTATTGTATGAAGGAGAGGTAGAGGAGGTGGCGCATAGGGCAGGGCTGACCTACTCCAACAACCTGGAGCGAATGCCCTGGCTGGAGTACAGAGAGGGACGTTCAGACTACAGCCTGCGTCCCTCCCCTAGGCTCTTCTGCTCCCACCTCACACCCACCCTGCTGCCC
>TU94209
ACCGTGAACTTTCTccttttccctctccctctctctctcgatctCCTCTGTCCTCAGACCTGTGTGTTAAACAATGGCGAGCTCGGTGGAGATAGTCAGCCCTTATCTCTTTCGCTACAAAGGCTATAACTTCGCGCACGGAGAGACCACCCCGGAGTACATCGACTCGCTGCAGGACTTCGAGATCCGCGACAGCGACGTGTTCCTCGTCACCTACCCCAAGTCCGGCACAGTATGGACCCAACAGATCATCACCCTATTGTATGAAGGAGAGGTAGAGGAGGTGGCGCATAGGGCAGGGCTGACCTACTCCAACAACCTGGAGCGAATGCCCTGGCTGGAGTACAGAGAGGGACGTTCAGACTACAGCCTGCGTCCCTCCCCTAGGCTCTTCTGCTCCCACCTCACACCCACCCTGCTGCCCCGTGGCCTGAGGGAAGGGAAGGGCAAGGTTG

Function

GO:

id name namespace
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015032 False 351 mRNA 0.58 2 42627206 42629462
TU94209 True 455 TUCP 0.57 2 42627133 42629493

Neighbor

gene id symbol gene type direction distance location
AMCG00015037 NA coding upstream 27478 42589500 ~ 42599655 (+)
AMCG00015018 LOC108273026 coding upstream 280354 42337369 ~ 42346779 (+)
AMCG00015019 ep300,LOC100700725,LOC106607167 coding upstream 323835 42273711 ~ 42303298 (+)
AMCG00015013 NA coding upstream 363053 42234599 ~ 42264080 (+)
AMCG00015003 NA coding upstream 441752 42171190 ~ 42185381 (+)
AMCG00015033 LOC104951289,LOC102789488 coding downstream 11263 42640756 ~ 42649261 (+)
AMCG00015043 NA coding downstream 82866 42712359 ~ 42777983 (+)
AMCG00015039 adsl coding downstream 152375 42781868 ~ 42790274 (+)
AMCG00015042 NA coding downstream 170225 42799718 ~ 42810704 (+)
AMCG00015038 NA coding downstream 183237 42812730 ~ 42819134 (+)
G75414 NA non-coding upstream 73326 42546004 ~ 42553807 (+)
G75297 NA non-coding upstream 299519 42326183 ~ 42327614 (+)
G75293 josd1,LOC107660868 non-coding upstream 307015 42312680 ~ 42320118 (+)
G75294 NA non-coding upstream 308817 42317870 ~ 42318316 (+)
G75284 NA non-coding upstream 410609 42214594 ~ 42216524 (+)
G75471 NA non-coding downstream 75592 42705085 ~ 42705397 (+)
AMCG00015030 NA other upstream 151249 42425454 ~ 42475884 (+)
G75295 NA other upstream 221945 42389869 ~ 42405188 (+)
AMCG00015014 rbx1 other upstream 398998 42218654 ~ 42228135 (+)
AMCG00015004 phf5a,PHF5A,LOC102780084,LOC107584099,LOC106609350 other upstream 526653 42097868 ~ 42100480 (+)
AMCG00014980 LOC108431982 other upstream 852998 41770872 ~ 41774135 (+)

Expression


Co-expression Network