G67658


Basic Information

Item Value
gene id G67658
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 500007 ~ 501785 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84499
TATAAGCACATTTATATCTGGACACtcctttatttacatttgaaaattacAGTGGACAGCTATTTCATAGATACAATGGGTTCTTGCAGTGCCATTGCTCAGGCAGAACACACTACGTATAAAAACACTAGATCTTTCCTTAGATTAGGGAGTGAAATGAAcccataaataaaaaagaacatgtACAAATATCACAGTCTTTGAACTCTGGCGTTTCATTACATCCCATTAAGCCCCCGGTCAGAAGGGAAAAGACCAGCCTGCTTCCCAAAcggcaaaacaaatattgcattaaATCATAAGGGAAGAAACAGaaccaaacaaaatgtgaatctgGAACAGATACAAGGAAAATTCAAGTGCGCATGCAGATGCTTACATTGTTACTCCTGATTCAGTGTAGTTTGTTTTCAATGATGCAAAGAAATTAGATATTGCagtaatttcatatatataatctgcATGTATTACCAGTTTGTTTGTTACTCTGTCCTTGACCTCTGTCTTGGCTGTTACAGTTCTGTTCTTCCAGTTTTattagaacattttatttagtggACCTGGAGACACTGTGGCATAACAGTGACCTTTTTCAATACAGTCTTGCCAAatgctccacacacacacaaatgcccTAATCTGTTATGAGTCTGAGGAGGAAGGCATGctttttaatataactttaaattgaCTGCATTTCAAGATCATTAACAACAGACACTCTATGCCCTTCTATAAGATGTAGGCAAATATTCCCACTTATGTACAATCCTATTATCTGTGAAGCTAGTAGAAGATTTCCTCATGATATGGTTTGAAGGTCTcgtaaacaatgaaaacaaggcagaaaagaaacaacaggATGATGTTTATCATTTCAGAGACCATGTCAAACTGGAGTACCGGTGCTGTAATGAGAATGTGAAATGAGGGCTCAGGCTCTGCCGTGGCGGAACGAAACAAAGTTACTGAACCTTTCAAACGCCGACCGATTCGCACTGCCCGAGTCAACGTCTGTCTGAAGGAGCAGAAATGCTGCCGTTTACCTGACAGCGACACCGTCTCACAGCATCTGTCTTTCTGGGCAGTTTGTAGGACACTGTCTGTGGGACACACCTTGCTCAGCATTGTGTAAGggcaaaaaacaacacacctcCATCTGCAATGCGATATTGGTAAAGACCATACTGTCCTCGAGTCGAGCGCATGTGCTGAACCTGAGCCGCTGCAAACTGGAACAAAGGGAAGTGCAAACAAAGAAGTTCCAGGGAGAGCCAGGGGAGACAGCAACTCTCCGCTTGGAATAAACGACAAAAGAGCTTCTTGAGGATTGGCAAACCTCGGCACACGTGATACGTATTACAAAGCCTCTTTGATTCAATCAGAAACGATGGCAGGGTTTAGGACAAATACAGGTCTTGTAAAACAACAGGTACTTGATTAAAATGTGATGCTTTGGCCACAGCCTTGAGAGCGGAGCTGAAATACTCCTCACGGTGCCTGAATCAACGGCTGTCCTTTCCGATCATACTGAGGAGAGAGAACAGCCAACCAGCGGTGAGCAAGAGGACGTCTCACTGCAAAACTCTGACTTATCTATGTACACGGCACCATTCTGCATTATTGGCAGAGTTTtctatcttattattattactactattattatatgttatccctattcatattttaatctcaCAGACACTGAATTTCTCTCTGCTGCTGGTGTGTCAAACATACGTGTTATTGTGTCcgagtatttatatatatatatatatatat

Function

GO:

id name namespace
GO:0031290 retinal ganglion cell axon guidance biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04742 Taste transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU84499 True 1779 lncRNA 0.41 1 500007 501785

Neighbor

gene id symbol gene type direction distance location
AMCG00014070 NA coding downstream 170590 289769 ~ 329417 (-)
AMCG00014067 NA coding downstream 316992 180009 ~ 183015 (-)
AMCG00014063 NA coding downstream 370487 102032 ~ 129520 (-)
AMCG00014064 NA coding downstream 398009 98483 ~ 101998 (-)
AMCG00014060 NA coding downstream 454726 7135 ~ 45281 (-)
AMCG00014074 NA coding upstream 13356 515141 ~ 527366 (-)
AMCG00014073 NA coding upstream 27378 529163 ~ 529462 (-)
AMCG00014075 NA coding upstream 32393 534178 ~ 539460 (-)
AMCG00014072 NA coding upstream 42682 544467 ~ 562632 (-)
AMCG00014076 ncam2,LOC108426076 coding upstream 66144 567929 ~ 577078 (-)
G67646 NA non-coding downstream 113066 386733 ~ 386941 (-)
G67638 NA non-coding downstream 153882 344414 ~ 346125 (-)
G67633 NA non-coding downstream 179387 256400 ~ 320620 (-)
G67632 NA non-coding downstream 179688 256052 ~ 320319 (-)
G67686 NA non-coding upstream 369268 871053 ~ 871627 (-)
G67691 NA non-coding upstream 595871 1097656 ~ 1097979 (-)
G67818 NA non-coding upstream 1318827 1820612 ~ 1821759 (-)
G67849 NA non-coding upstream 1440242 1942027 ~ 1942420 (-)
G67881 NA non-coding upstream 1555064 2056849 ~ 2059491 (-)
G67612 NA other downstream 328793 61992 ~ 171214 (-)
G67683 NA other upstream 288743 790528 ~ 790957 (-)
AMCG00014098 NA other upstream 1062993 1564778 ~ 1569929 (-)
G67813 NA other upstream 1299877 1801662 ~ 1869448 (-)
G67825 NA other upstream 1338380 1840165 ~ 1842445 (-)
G67824 LOC103352860 other upstream 1357757 1859542 ~ 1863693 (-)

Expression


Co-expression Network