G67813


Basic Information

Item Value
gene id G67813
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1801662 ~ 1869448 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84685
aACAGAGCCAGAGCGCAGTGCCGCCTTGTTTTTTTgaagtttatttatgtaatacagTGTAGAAAGCTTTCCCAGTCACAGCAATGTTTGTACAGTcgcacagagatacagagaatCCCCCGGCTCCACGGCCCCCGGGCCCGCACTCGCACtgcgggagagggagagagagagcgagcgggGCGGGGCGGTCCGTCCAGAGCTGGTGGCGAAGCACAGCATCGTCACAAGAGCAAGAAGAAGAGTCgcctgcactgacacacacggATGAAATAAGCCACGCCCCTCTCCCCACTCCACCACCCCCGCCTGCGCTGGCTTTGGTACAGTCCAGGCTGCCCCGCCCACCACAGGGGGTCAGAGTTCAACAGGCCAGAGCTCCGGCTTCTGATCGGCCCAGCGTGGAGAGACACGCACCCGGTTCGAGAGCTTTGGTTTAAGAGTGCGACTTGGTGCGTGTCCGACTGTGTCAGAGTGCGCCAATAGTGTGACTACATGAGAGGAAGTGAGTGAGTGCGACTAAGCGAGTGTGTgaatacctgtgtgtgtgtgtgtgtccctctcggACGCGCACATGGGCTGGAGACTGCCACGCACTGACGGAGCTAAAGGAGGCGTCTGCTGAACACACCCTCACACTGACCCATGCCCAAATCCTCCGCACCCTCCTCCTGTCTTCCTGCAGCTGGGCAGCGCTGTCAGTCGCCTGACGGGGATCTGGTGGAGAAACACAACATTGCCTTCGGACCCGGCGCCGCCCGACACACACTCCCACGACTGAACATTAAtaacggggggtgggggggcaggaggcCACAGCTAGTGCAGGAGCCGGCTGCCGGGGCCGTCTTGCTACATTCCACATTCCGACAGGCCAATTAAGTAACGAAGGAGCCAATTAGGGGCTGTGGCCATGGGGGGGGTAAGACTTAAGAGGGGAAGCTTGGGGGTGTTGGGGAGGCTGCTCAGAAAAGGAGGTGCGTCTCTCACACATACatcctctctctcatctctctacAATAAcacgtctctctctcactctcctctgcctctctcacCCTGTCGTTACTCTCCACGGCCCGGCCACACCCACACCATTGCACATGCTCGGACACGTCTGCTGCCACCCACCCCACCGCCACAAAAGCAGCCGGTGGCACAAAGCCACGCCCACACCACTAACCACTCCCTCCGACTCGACCGGCGGCTCCCACTGCCAGGACAGCACAACGGCAACCCATGGGACAGGAGGGGAGACTGCGAGGCGAGAGGAAGAGAGGCTGAGCGAGGGATGAGGGGTCCGTCCAGCTGTCcggagaggaggaggatgacgaGGAACAGAGGCCGGCTCCTCCGCCCAGGGGCCCGGGCACCACCACGGTGACAACGGGAGAATAAAGTCAAACAccagacaataaaataaaatgaaacgtCTTAACGAGATCCAGAACGACTCTCTCAGAATGCATAGGAAGCCAACGCGACCGCTCCGATGAACAGCacaacccccgcccccccggccACGCGACGCGAGCTCTGGACACCAGGGGGAGCTGCTACATAGGAGGacgaacaaaaatatatataaacagaccCCCGAAAACCTGAACTCAACAGACGGATGAGCGGAGCGGAGCGGAGTCTCTGAAACAGCAGACCGGAGACTCTGAATCTGAGATCGTcttgttttcgttttttaaacCACGTGATCACAAAGAAGTACTAACTTTACAACCCTGCTAAAATACACAGTCTCTACAGGAGAAGGACGAGGCCAGATAGCGGAACGGAAAACAAACGCGCAattagcactttttttttctccatttttttagtttttttttcattattaacattttgtccTGTATTTATGGTCATGCACTACACAGCAACAGCTGGCCTCTGTCCGCAACTGGACACATCACacggaaataaaaaacattcagctCGGATTGGCGGTCCTCCGTTTTcacctttttttccattttttatttgaacttCCTGTCTTTCTTCAGTGATTCGATTATTTATAatcaggtttgttttttttgttttagttttttttctattttcttttttttttggtaaaataataaaataaaaagctcatCAAAGACATTActgagtgtttttgtttcttttcattaagaACCTGTGTGTGGTCAAGCACAGCGCAGCTGTCACCAGAAaaaaggaggagaggaggagggaaagaaggagggataggagggagagagaggagaggagggaaggggaggggagagagagtagGGCACAGGCATCGAGCAGAGAGCCCCGCCTGCTCCCTGTCCCCGGTGCCACCCTGCCAGGGCAGTGTGGGCCGCTCTCGGCACCGGCTCACTGCCAGTCAGCGGCCCGCCTCCGTGCCGCCCCTCACCGGAGCACGAGGGGGCGTGGCCTCCCTGCTGCAAGCCTGCTGATTGGACAAAGACACCTCTCCCCAGCaacaggggggaggggggtagtGGTCTATTGCTGTGGAGAAGGGCCCCTTGTCCAATCAGAACAGGCCTCTCGGATCCGGTCCAATCACAGCACAGGGGAGTGCCGTGCctcagactgactgactgacggacacacagacagacacccacagtgactgactgacacactgacggaCGGGAGGACACACTGACAGAGCCGCAGTGTGCTCAGTGCGTCAGTGCTGGACACACACTGCCCTGGACACTGGGGCAAGCCTGGAGGTcagagggggaggggcctgGGGACGATAGGAGagggaaaggaggaggaggaggaggaggagaggaggaagagggagggagagtggggCCTCAGTTCTGCATCTGCTCGAAGAACTTGTAGGTGGGGTTCTCATAGCCGTTCTGCTGCATCTTGGACAGGTGGCGTTCCTCTGGAGTCACTGCCGCGTCCAcct
>TU84686
aACAGAGCCAGAGCGCAGTGCCGCCTTGTTTTTTTgaagtttatttatgtaatacagTGTAGAAAGCTTTCCCAGTCACAGCAATGTTTGTACAGTcgcacagagatacagagaatCCCCCGGCTCCACGGCCCCCGGGCCCGCACTCGCACtgcgggagagggagagagagagcgagcgggGCGGGGCGGTCCGTCCAGAGCTGGTGGCGAAGCACAGCATCGTCACAAGAGCAAGAAGAAGAGTCgcctgcactgacacacacggATGAAATAAGCCACGCCCCTCTCCCCACTCCACCACCCCCGCCTGCGCTGGCTTTGGTACAGTCCAGGCTGCCCCGCCCACCACAGGGGGTCAGAGTTCAACAGGCCAGAGCTCCGGCTTCTGATCGGCCCAGCGTGGAGAGACACGCACCCGGTTCGAGAGCTTTGGTTTAAGAGTGCGACTTGGTGCGTGTCCGACTGTGTCAGAGTGCGCCAATAGTGTGACTACATGAGAGGAAGTGAGTGAGTGCGACTAAGCGAGTGTGTgaatacctgtgtgtgtgtgtgtgtagagagagagtg
>TU84687
aACAGAGCCAGAGCGCAGTGCCGCCTTGTTTTTTTgaagtttatttatgtaatacagTGTAGAAAGCTTTCCCAGTCACAGCAATGTTTGTACAGTcgcacagagatacagagaatCCCCCGGCTCCACGGCCCCCGGGCCCGCACTCGCACtgcgggagagggagagagagagcgagcgggGCGGGGCGGTCCGTCCAGAGCTGGTGGCGAAGCACAGCATCGTCACAAGAGCAAGAAGAAGAGTCgcctgcactgacacacacggATGAAATAAGCCACGCCCCTCTCCCCACTCCACCACCCCCGCCTGCGCTGGCTTTGGTACAGTCCAGGCTGCCCCGCCCACCACAGGGGGTCAGAGTTCAACAGGCCAGAGCTCCGGCTTCTGATCGGCCCAGCGTGGAGAGACACGCACCCGGTTCGAGAGCTTTGGTTTAAGAGTGCGACTTGGTGCGTGTCCGACTGTGTCAGAGTGCGCCAATAGTGTGACTACATGAGAGGAAGTGAGTGAGTGCGACTAAGCGAGTGTGTgaatacctgtgtgtgtgtgtgtgtgagagagagagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84685 True 2920 TUCP 0.56 3 1866394 1869448
TU84686 False 569 TUCP 0.58 3 1801662 1869448
TU84687 False 570 TUCP 0.58 3 1806669 1869448

Neighbor

gene id symbol gene type direction distance location
AMCG00014097 NA coding downstream 263457 1537057 ~ 1538205 (-)
AMCG00014090 NA coding downstream 347045 1453775 ~ 1454617 (-)
AMCG00014091 NA coding downstream 388815 1391356 ~ 1412847 (-)
AMCG00014082 NA coding downstream 521265 1267242 ~ 1280397 (-)
AMCG00014080 NA coding downstream 569061 1231624 ~ 1232601 (-)
AMCG00014109 NA coding upstream 26217 1895665 ~ 1898909 (-)
AMCG00014107 NA coding upstream 33968 1903416 ~ 1903733 (-)
AMCG00014110 NA coding upstream 36702 1906150 ~ 1915590 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding upstream 160142 2029590 ~ 2031527 (-)
AMCG00014117 NA coding upstream 162793 2032241 ~ 2032429 (-)
G67691 NA non-coding downstream 703683 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 930035 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1299877 500007 ~ 501785 (-)
G67646 NA non-coding downstream 1414721 386733 ~ 386941 (-)
G67638 NA non-coding downstream 1455537 344414 ~ 346125 (-)
G67849 NA non-coding upstream 72579 1942027 ~ 1942420 (-)
G67881 NA non-coding upstream 187401 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 480677 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 738821 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 827360 2696808 ~ 2701159 (-)
AMCG00014098 NA other downstream 231733 1564778 ~ 1569929 (-)
G67683 NA other downstream 1010705 790528 ~ 790957 (-)
G67612 NA other downstream 1630448 61992 ~ 171214 (-)
AMCG00014105 gabpa,LOC106586689 other upstream 402 1869850 ~ 1873422 (-)
AMCG00014108 NA other upstream 9755 1879203 ~ 1885432 (-)
G67835 NA other upstream 22615 1892063 ~ 1892553 (-)
G67832 NA other upstream 31192 1900640 ~ 1902615 (-)
G67843 NA other upstream 47279 1916727 ~ 1918182 (-)

Expression


Co-expression Network