G68292


Basic Information

Item Value
gene id G68292
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3954366 ~ 3955265 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85329
cagcgctctccaccaccatcatcaaaaccccaaatgagggaaaatcttttggaaaaatggtgtccatccctccagtagagtacagagactcgtagaatctgtgccaagagcattgaagctgttctggggctcatggtgcccaacaccttactgacgCACTTTATGttggattttcctttaatttgtcatccgtctgtatatacacatacaattacTAATTTCTATTGGAGCAATCCAGTACAGTACCTTCTcgagggtacaacagcagtgtcccctaCCTGGGTGTATCAAATATCAGTTGAGGAGAtttatgaatgaatgcatgTCTTCTGATTAATGCTCATTGCCTAAATAATTAGCTTTGAAATGTGTGGACATTTAGTGATTAATCACACCCCTGCCTTTTTATGAGGCTAATAAAACCGTTAAAGTCTGATCTTACTGCGCAGTGATGAATTGGCAGTCATCAGTGTAAGACACCCCATTATTCTGCCGTCTAATGTTCAGCATATCATGACATCACTCGTGATCCCACACTGAACTGGGCATCCCGTCCCTGTGCCGAGTGTATTTCTCACGGATAACTTCCCAGCTGCTTTAATTCAAGAATGAATGTGATTTTGGCATTTGAGTTTGAATTCCTCCAAAATCATTTTGTACGATATAGCTTTCAAGGGAAGAGAATTTCTGCTTAGGATTTTAACAGTAAATCAACAGTAAGGACCTCTATAGACAGTATGAAGAGCAACTTCCAAATCCAGGGAGTTTGGGATTTAATGGCGATTTAGGGATAGTTATATAATCTGGTATTTTTAATAGTGCCGGGCCTTAGGAGAGAAAAATAAGGGTCACAGAAAGTGCTTTGATGCTGTTCCAAGAACCGACTGCCTTGTATTTCag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85329 True 900 lncRNA 0.41 1 3954366 3955265

Neighbor

gene id symbol gene type direction distance location
AMCG00014192 msl3,LOC106574410 coding upstream 4089 3933258 ~ 3950277 (+)
AMCG00014186 clcn4 coding upstream 325284 3617227 ~ 3629082 (+)
AMCG00014187 NA coding upstream 339285 3595095 ~ 3615081 (+)
AMCG00014188 NA coding upstream 371421 3582619 ~ 3582945 (+)
AMCG00014183 NA coding upstream 394657 3558918 ~ 3559709 (+)
AMCG00014194 NA coding downstream 91706 4046971 ~ 4081904 (+)
AMCG00014195 prps2 coding downstream 133098 4088363 ~ 4098941 (+)
AMCG00014197 NA coding downstream 150919 4106184 ~ 4118772 (+)
AMCG00014199 NA coding downstream 249890 4205155 ~ 4220124 (+)
AMCG00014198 NA coding downstream 268279 4223544 ~ 4227643 (+)
G68189 NA non-coding upstream 470717 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 578577 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 579218 3374837 ~ 3375148 (+)
G68153 NA non-coding upstream 726240 3226859 ~ 3228126 (+)
G68151 NA non-coding upstream 727867 3224574 ~ 3226499 (+)
G68317 NA non-coding downstream 128498 4083763 ~ 4083964 (+)
G68374 NA non-coding downstream 338061 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 339552 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 545599 4500864 ~ 4550002 (+)
G68434 NA non-coding downstream 629209 4584474 ~ 4588428 (+)
AMCG00014146 NA other upstream 1244037 2706840 ~ 2710329 (+)
G67896 NA other upstream 1824221 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2051679 1900220 ~ 1902687 (+)
G67801 NA other upstream 2073325 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 2116241 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 172211 4127476 ~ 4131718 (+)
G68475 NA other downstream 693935 4649200 ~ 4651964 (+)
G68830 NA other downstream 3390930 7346195 ~ 7349467 (+)
G68848 NA other downstream 3458375 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3509238 7464503 ~ 7482560 (+)

Expression


Co-expression Network