G68317


Basic Information

Item Value
gene id G68317
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4083763 ~ 4083964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85358
TCCTCGCCGTCACCCGTCTCGGTTGTGTTTGAGGTGAGTTGCTCTCCAGTCTCCGTGCATGATGGAAATCTTAGCATCTGTGTCCGTGTGCAACAGTGTCCCCATTTTGACCAAGACACCACAGGAGACTCCTCTAATCCAGGATTGTGTCGGTCGGCATCCGTTCTGTTTTTGCCCATTGTGTGAATTGTTATGTTTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85358 True 202 lncRNA 0.50 1 4083763 4083964

Neighbor

gene id symbol gene type direction distance location
AMCG00014194 NA coding upstream 1859 4046971 ~ 4081904 (+)
AMCG00014192 msl3,LOC106574410 coding upstream 133486 3933258 ~ 3950277 (+)
AMCG00014186 clcn4 coding upstream 454681 3617227 ~ 3629082 (+)
AMCG00014187 NA coding upstream 468682 3595095 ~ 3615081 (+)
AMCG00014188 NA coding upstream 500818 3582619 ~ 3582945 (+)
AMCG00014195 prps2 coding downstream 4399 4088363 ~ 4098941 (+)
AMCG00014197 NA coding downstream 22220 4106184 ~ 4118772 (+)
AMCG00014199 NA coding downstream 121191 4205155 ~ 4220124 (+)
AMCG00014198 NA coding downstream 139580 4223544 ~ 4227643 (+)
AMCG00014200 NA coding downstream 158846 4242810 ~ 4244022 (+)
G68292 NA non-coding upstream 128498 3954366 ~ 3955265 (+)
G68189 NA non-coding upstream 600114 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 707974 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 708615 3374837 ~ 3375148 (+)
G68153 NA non-coding upstream 855637 3226859 ~ 3228126 (+)
G68374 NA non-coding downstream 209362 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 210853 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 416900 4500864 ~ 4550002 (+)
G68434 NA non-coding downstream 500510 4584474 ~ 4588428 (+)
G68473 NA non-coding downstream 563746 4647710 ~ 4648213 (+)
AMCG00014146 NA other upstream 1373434 2706840 ~ 2710329 (+)
G67896 NA other upstream 1953618 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2181076 1900220 ~ 1902687 (+)
G67801 NA other upstream 2202722 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 2245638 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 43512 4127476 ~ 4131718 (+)
G68475 NA other downstream 565236 4649200 ~ 4651964 (+)
G68830 NA other downstream 3262231 7346195 ~ 7349467 (+)
G68848 NA other downstream 3329676 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3380539 7464503 ~ 7482560 (+)

Expression


Co-expression Network