G68590


Basic Information

Item Value
gene id G68590
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5779485 ~ 5782392 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85704
acacacacggcctGGCACGAACACAACAACACTCACCCGTCGACGAAGAACAATGACATTCGCTGTGACGAACTGTGAGAGACGAAGGGCCGGGGTCGACGGACAGAAATAACCACTGGTACGACTCCACCACTGGGACACAAGCCGGTGGGGACTGACAACGTGGACAGGAGGATAGTGTGTTTCAGCGTCTCTTCGGCAAAATCGtcgtgtatgtttgtttgttttttttgtacattgtaGGGAACATTAActgcatacaaacacaaaaccataGCCGGAGAAACATCACAGTCCTGGACTGGATTGGTGTGTCTGAAGAGCAATGAGAGGTGGACCAGGAATCAACAGTGTATATGTAGATAGTAGTacagatacacaaatatatgtCTATGGCTACTTGACACAAGATACACTCAGAATGATACTCAGACCTCTGTAATACAACCTTTTACCTCCGTGTCAAAATAAAggatgtgtgttttcatttcccTTGTTGCTGGTTACTGTACAAtctgctttaataaaaaaatatcaaaatattagCAGGAAATAGAATATAGAGCTCAATGTTGCAGTTAAGGAAATTGGGACTATATTACCTATGTTTACTACATTTACTTAAAAGtaaagcattttatatattttgaaaactaCTGTTATAAGCTGTTATAGCTGATTTATATAGAACATTTATGgcaacattaatattattttcttagaaAACGAGGTGCTGATAATTCAtgtggatattttattttgagaaagagGAGGTAAAAGTGGATATAGTCTGAAACAACCCAGGAAATAACGGACACATAGTTGCACATCAATGTCTCTTGAAATAAAGACTACACACAGAATATAACACCAGAAAACACATCCTTCGAAGGCCGAACAGCCCGGTTTAAAACTTAAACAATTTCAACACAAGAATGGAacagtttcttctttttttgcatCAGTGTGATGGACAGGTTTACGATACAGGAATGGCACTTTATTGAACTCATGATGAGCGAATACTGTTGATGCAATAGTGGAAATTACAGTAAGTGTGAACCACCAAAATCCCATGTTGTTACATAGTAACGACCAAAGTGTGTACTATATAACAGCTTGGAAGAATGGCCCTGTGTTATTATCCTGTAATAAGCGTGTTGTAGTAGGAGCCATTCCTAAACACGCAGTTATGAATATCAATCACTCAGCAATagcatgactttttttttgcatctggAAAATTTTTCGATACTCACAGTGCCACACATTGGTCGTCCTAAATCAGCATCATACTTCTACTTAAAATACTCTGTTACTTCAAAATCATAACTGTTGGTTAAAGTGCTGATatgataaatattaaaatatagaaaatatactttagaaaagtgaaatataatattaGTACTCGACGAACGAAAAGTAAGTGATTCGATGTTTTGTATAAAAATTGCACTTCTAACCTTTGGATTCCCTTTCCATTGTGTCAGAATCAGACTCAAATAGAGTTTCTGTCCTTTGCCGTTGTGTCTAcgttttgtgcatttgtttattgatgCCAACTGAAGATAAATGACTCGATACCTGGCTATCCCTCCTACGTGCTAGAAAAACCAAAGGACTTGAATTAAGTAACTGAACTATTATTACAAATCCTATACAGGGAATTACTGCAATGATCTGCCCAGGAAAGCATTTGCAAATACATCTAGTCGTCTCTGAGGTGGATTTAACGCTTAGACAGATCAAACTTTACAGTGCTTAACAACCAGGTCCTATAGTAAGGGAGGTAATGGACTGAACTGAGTTACAGGACAGAGACTGGTTTGCATGAAAACTCTGAACATTAAGGTACGAGATAAATAAGAAGTATTGGAAGCTATGACCCCAACCTACAGTAACCGTCAAGTGCAAATTCCAATCCCAGTATCTGATTCTCTGCTCTTCTAGCTGATGCAAACCTGTCATGAAGtccatttgttttagtttgatgGTTGGAAGGTGAGTTGAAGTTGTGATTTGCTTTGGGCTTATGCACAATTCATTTAGTAAGCTTATTAGTGGAACAATCATTCGAATAACCTCAGCTTCACCCGAATGCTAGGCAAGCTTGTTGTGTCaggaatttataaattatacatatctGTTGAATTAGATATATGCAGTCcattaatttgtgatttgtcGCGCAATTGGGTGTGCTTTTTGCCACATTGTTGTTAACGAGCAATTAAAtcctaattattatttcataatttcatgAATGCCTAAAAGTGCAGCATAAAAAATGCATGGCTTTTTAAAGTTGTATACTGGCGGTCAAAATGAGAAGTCTCCCTGGGAATATAACTGATCTGATTTCAAAAGTTGGCAGCGAAATGAGAGCGAAATGTTTTGTTCGTCTTCGATGCCAAGAGGTTATTATTGCTGACGTCACGCGGAATTAAATCTGattaaaagaagaacaaaacagaatgaGCTTCAAACAGGGGCAAAGTGGAAGTCAAGCCAGGAACGCTTCATTCAGCGCAGCTTCGCATTTACACTTGATTAATAGCAGAGGATCACATTGGAGCTCCTGCCTAAATATTGTGCCGAAATATTTCACTTGTCTTTTCCtcgtcttttttattttgtttcagacagGCAACATCCAATTACCTCGCACTCCCAACACAAGACTCGCTCCACGTGtttaaaagtgttttgaaaCGCAGGCAACTGAACTGCAGAAGTCAACCTGTTTCGTGTGAGTAAATTAAACCAATTCCTATATATTTACCTGACACCAAATACAAGCTGGATTATGATTACATATGTTCATGTTTAACAAAGTTATTAAAGCTAAACTagctgatttgttttaaatactagAGCATTTTACTGGTTGGGATTTATGAGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85704 True 2908 lncRNA 0.37 1 5779485 5782392

Neighbor

gene id symbol gene type direction distance location
AMCG00014226 NA coding downstream 80558 5679216 ~ 5698927 (-)
AMCG00014227 NA coding downstream 123907 5644852 ~ 5655578 (-)
AMCG00014215 NA coding downstream 915167 4859257 ~ 4864318 (-)
AMCG00014212 tbl1x,LOC106582098,LOC102307724,LOC101465000,LOC102798223 coding downstream 1173524 4588397 ~ 4605961 (-)
AMCG00014211 NA coding downstream 1213541 4560163 ~ 4565944 (-)
AMCG00014231 NA coding upstream 44367 5826759 ~ 5843215 (-)
AMCG00014230 NA coding upstream 63896 5846288 ~ 5850922 (-)
AMCG00014232 NA coding upstream 81964 5864356 ~ 5866524 (-)
AMCG00014233 LOC107697803 coding upstream 104079 5886471 ~ 5891251 (-)
AMCG00014236 NA coding upstream 110819 5893211 ~ 5893946 (-)
G68581 NA non-coding downstream 69405 5709818 ~ 5710080 (-)
G68572 NA non-coding downstream 75558 5657305 ~ 5703927 (-)
G68547 NA non-coding downstream 191493 5587499 ~ 5587992 (-)
G68537 NA non-coding downstream 381250 5397828 ~ 5398235 (-)
G68535 NA non-coding downstream 445102 5334092 ~ 5334383 (-)
G68595 NA non-coding upstream 43112 5825504 ~ 5825929 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding upstream 271719 6054111 ~ 6056331 (-)
G68722 NA non-coding upstream 752088 6534480 ~ 6534701 (-)
G68724 NA non-coding upstream 897633 6680025 ~ 6680288 (-)
G68757 NA non-coding upstream 1208211 6990603 ~ 6990867 (-)
AMCG00014228 NA other downstream 100986 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 2384731 3385757 ~ 3394754 (-)
G68088 NA other downstream 2950341 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 3126238 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 3236788 2531954 ~ 2542697 (-)
AMCG00014241 NA other upstream 277097 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 1595696 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 1619760 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 1631337 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 2352511 8134903 ~ 8139126 (-)

Expression


Co-expression Network