G68665


Basic Information

Item Value
gene id G68665
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 6112656 ~ 6114964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85805
CGGAATCAATACAAAAGTGAATAAAACTCACCGTCTCCTTCAATCACGCGGTTGCAGTGGTAGCAGACATCGCCGAAGAGCTGCGGGGATTGAGGGGACAGATTAGACCACCGGACCCGGCTGCGACTGAGCCCGTTTATGTCACACGCAGCATATCTTTGGGCCCAATCAGGAAAAGCTAATTTAGTCCCTCTAGTCTGAGCAGAAGTGTCCTTCACCAGAAACAAACTTCTCATGCAGAGGGTTAGCCGTGTAAACTGTACAGATTGACTTGTTTCTTCTTTCCACCAGTAGGGGGCACCGCAACACAGCTGACCAGCAATAGTTTCTCTCTGCTGCGCTGATAAACGCGGCGTCTcgtacagtacagtatggtGCAAGTTTCTGTCACATCTGACATCTGATAAACAGACCGGAGCAGTTTATCTCGCTGATCTTCAGTGTGACAGTAATAACGACAGTCAGAAAGTTACACACTTGTGATCACAGGGATAAAGGCCCTGCACTGCTCCAGCCCAACCAAAGTTGTTATTATTCAGACAACATGCATCAGTTCCTGTGTCAGCCATTTGGACATGGACTGCACACACAGGTGACATGAGCTACCCATACAGAGACTacacatgtatttgtgtgtcagttctcATTAAGTGTATGATCATCAACACGTAATATGTAAAAGTGCAATTATCatcttgattgtgttttttttcctatagGAGTTCAGGATTGTGAGTCAAAAGGTCTTATTGTAATAGTAATCTTGACGCTGATGACACAGTGAGGGTGTTGTTTGTGCGTTCTGACAAGGGGATGCACTCGAGGCGCCCTACCTGGTTGTAGTGCGTCTCGCAGTAAGCCAGGCCCTTCCTCTCGTAGTGACGGTGTCCGAGGAACGGCTTTTCACACTTAGCACACACAAAATGCTGCAAAAACACGTCACCGGCCCAATGCGTCAGTCAGGGTGCAGTTCACAGCACACATTATTGCAGTCGGGACAGAGCGCAGCAGGACACAGGGCTGGAGGGGCTCAGAGACGCGGCTGTGCGTTTATTGTGGGCGTTTGTTTTGGGGGGCAGGGTTTTCAGGTCATGCTGAGAAGGGTACATTGTTTTTAGAGAGGAGAATTGACAAATCAGGGGTTATAACTCAATTTAACAATCAAGGACCCCCAGCAGGGTGTAAACACTGGTGTCTGGGGGCCCATGGAGGCGCTGCGTCGTCCTGAACCCCTCCCATGTGAAGGGCCGGTGTCGGGGGGGCAGGCAGGGTCAACGGGAAGCTGAACACCCGGTGCAGGGACAGCGCCCGCTCGCTGCCCCGGCCCTCACCATGTCCAAGTGCCTCTCGCAGTAGGCGTGGCCCCCCCGCTCATAGTAAGGGTGCCCCTGGAAGGGCCGCTCACACACGGCGCACACAAAGTGCTggcccagggagagagaggcagagaaacaCGCAGGTAAGGGACGGACACTGAAAAGGCATGTAAGAAGCAAAGGAGCAGAACCGActgagaggaggaagaggagagacaTTAAACACGGATAACAACAATGAATAACAGGATGAGATTCGCCTCCAGCACGGCCAGCAGGTCCATCTCAGTTCTGCTGCTGGTGGCTGACTACTCACACAGCAGCACCGCAACGGAGTCACGCGAACATAAAACTACgaggcattttcttttaaataatatattaaagaaataaataaagcaacagTGTCTTGGGGAAACAGCACAGCCTGGTCGAGCTTATTAGTATTAGTGCTCCATTCATTTCTAATATACGGACAATATGGACTTGTCTCTGGCAATGCCTTtgtgaaaggcgctatatgAAATAAAGGTTGATATTGTTTGACCGTGGGAGAAGCCTGGTTATACTGTGGTGTCAGGGGTCGGGGGTCACGCACCTCCACGTGCCACTGCTTGCCCATGGCATTGACCACTCTGCCCTCGATGGGCCGGCGGCAGGCGCCACAGATGGGAACTCCCATCTTGTCATGGCAGGGCAGGCAGTACAGCTCGCCCTTCAGCTCCCGGGCGTCGGCCGTCAGCTCCTTactgtggagagagggagatggagagagagagagaagtgagggaaaagagtgagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85805 True 2118 lncRNA 0.51 2 6112656 6114964

Neighbor

gene id symbol gene type direction distance location
AMCG00014237 NA coding upstream 58221 6033437 ~ 6054435 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding upstream 233399 5866905 ~ 5879257 (+)
AMCG00014224 NA coding upstream 337895 5755529 ~ 5774761 (+)
AMCG00014225 NA coding upstream 372735 5721897 ~ 5739921 (+)
AMCG00014223 NA coding upstream 469167 5607773 ~ 5643489 (+)
AMCG00014243 NA coding downstream 119839 6234803 ~ 6239921 (+)
AMCG00014253 NA coding downstream 616660 6731624 ~ 6732517 (+)
AMCG00014259 NA coding downstream 924790 7039754 ~ 7046875 (+)
AMCG00014260 LOC107688668 coding downstream 935372 7050336 ~ 7054907 (+)
AMCG00014261 NA coding downstream 958360 7073324 ~ 7073602 (+)
G68649 NA non-coding upstream 2350 6073717 ~ 6110306 (+)
G68637 NA non-coding upstream 56309 6054535 ~ 6056347 (+)
G68635 NA non-coding upstream 99597 6012682 ~ 6013059 (+)
G68623 NA non-coding upstream 156471 5897070 ~ 5956185 (+)
G68589 NA non-coding upstream 330270 5779378 ~ 5782386 (+)
G68686 LOC106586545,LOC106582186 non-coding downstream 89214 6204178 ~ 6206576 (+)
G68698 NA non-coding downstream 129938 6244902 ~ 6247049 (+)
G68728 NA non-coding downstream 598207 6713171 ~ 6714821 (+)
G68738 NA non-coding downstream 628899 6743863 ~ 6744111 (+)
G68771 NA non-coding downstream 941743 7056707 ~ 7058319 (+)
G68475 NA other upstream 1460692 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 1980938 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 3402327 2706840 ~ 2710329 (+)
G67896 NA other upstream 3982511 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 4209969 1900220 ~ 1902687 (+)
G68830 NA other downstream 1231231 7346195 ~ 7349467 (+)
G68848 NA other downstream 1298676 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 1349539 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 3888094 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 4033015 10147979 ~ 10151913 (+)

Expression


Co-expression Network