G68771


Basic Information

Item Value
gene id G68771
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7056707 ~ 7058319 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85947
GCTGGGAAGTGTGAGCACGTGCAGAACCCTCTGAAGATCAGTCGGACCTGTGCTTAGAACGCAAGAGCAGTATGGTCTGGTGTGGACCACTGGGAAGGGTTGtacttaaagaaacaaacaaaaaagcaacacacaaaacaacccCCAAGTGGACTTTGCTTCTCTGGGGTGTGAACTTCATTCCAAGCTCTCCTAGTGGGCCTGTCTGCTTAGGAATGCATTGGAGAGCATCGTGCCGTATCCCCCGGGGTCTGTCTGAGCTCCCGGCCGACTGGTTCTGTCCCCACTTGAAAGCTGGACATccggtctttttttttttttttttttgcatgtgaCTGAATTCAGCTTCACATTGGAAGTGAGAACAGTTCCAGGCTCTTTCCTGGTGGAGACCATGTGTGGTGATGCTCCGCTCTCCCAGCCTCCTTCCCCCGTGGCGGGTGGCGTCTCCCAGGGCCTCTGGACACCCATACAGCCCAAACCACAAAGAAACGCATCCTGCACATAGGTTTCATGGATACACTGCGATTCGCCAAAAATAGAACCCACCAATACATCTTGTCAACATAGAGGATGTCAATTTTAAAGTATAAGAACGTATGTGTAAAGTTTAAACCATGACCTATGTTTTAGGTATATCGATATGTCAATGTGTGCcagaaattgatttaaatagaCATTATAGACACACGTATGTTAAAATCTATACCTTTAGATTTCCAGAGGTTTCAATATGTGACTATTTGTGCAGAAAGGCCATCTATTTGTGAAATGTTCTCTCAGGATGTGTCTTTATATTCCTCTCGCATGGGAATGCAGGTCCAGGGGCCGGTAAGGGAAGGCAGTCTTATTTAACAGTGTCTGTTGACGGTGCATGTATGTCTTACAATCGTCTGTGTTCACTGCATGTTCAATGGTATGGTGATGATTTGAGGACTAGATCGAACCCAAACCCTCTTAGGATGTCACTCAGCCTGTTCCCAGATAGTGCCTTTGAAACAACCCTGCATGACAGTGAATACCTCGTTAACATTAGCCCCTCTTTAGGAACAATTAGAAACGATTGCATagttttccctgtgtgtctgtgatttgCATAGGAaccttaattgtgttttttgatcCCACGCATTTTCCCTCCCTGCGGTTATATAACCGAGCCGATGCCCTGAACTGAGTGATCggggttttattttgattacacACAATGAGTGTTTTGCCTGTGGTATTTGCTAATCAGGTCTCAAGTGTTAACAATGCTAGTTTCACACTTTTAAGGAggtctgtatgtatttatttttatataaaggagagacatttgtataaattgtgcaaaatgaaaatatgctaAGACACAAAAAACTTCCACAGATACCAGGCAAATACTTCTTGCTtctagtgtagtgttgtgtagatTTCTTCTTCAAATATCTTATCAGGAAACATAAAACGACTGTGATGCagactttttaaacaaaatgttatcaCTGTAAACATGCTCGTGCATGGAGTATAATCGACATATCTTTACCCTTAAGCAATACATTTatcacaatgcatttaaaaaaatatatgcaatgatgatctgaaataaatatggatttgaaCACTGA

Function

NR:

description
myopalladin-like isoform X3

GO:

id name namespace
GO:0035725 sodium ion transmembrane transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85947 True 1613 lncRNA 0.42 1 7056707 7058319

Neighbor

gene id symbol gene type direction distance location
AMCG00014260 LOC107688668 coding upstream 1800 7050336 ~ 7054907 (+)
AMCG00014259 NA coding upstream 9832 7039754 ~ 7046875 (+)
AMCG00014253 NA coding upstream 324190 6731624 ~ 6732517 (+)
AMCG00014243 NA coding upstream 816786 6234803 ~ 6239921 (+)
AMCG00014237 NA coding upstream 1002272 6033437 ~ 6054435 (+)
AMCG00014261 NA coding downstream 15005 7073324 ~ 7073602 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding downstream 170754 7229073 ~ 7237562 (+)
AMCG00014266 NA coding downstream 219803 7278122 ~ 7285235 (+)
AMCG00014273 tomm70 coding downstream 386697 7445016 ~ 7455956 (+)
AMCG00014274 nit2 coding downstream 425743 7484062 ~ 7489351 (+)
G68738 NA non-coding upstream 312596 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 341886 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 809658 6244902 ~ 6247049 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 850131 6204178 ~ 6206576 (+)
G68665 NA non-coding upstream 941743 6112656 ~ 6114964 (+)
G68904 NA non-coding downstream 567669 7625988 ~ 7626404 (+)
G68982 NA non-coding downstream 816208 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 956425 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 1074969 8133288 ~ 8136210 (+)
G69206 NA non-coding downstream 1676004 8734323 ~ 8735939 (+)
G68475 NA other upstream 2404743 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 2924989 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 4346378 2706840 ~ 2710329 (+)
G67896 NA other upstream 4926562 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 5154020 1900220 ~ 1902687 (+)
G68830 NA other downstream 287876 7346195 ~ 7349467 (+)
G68848 NA other downstream 355321 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 406184 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 2944739 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 3089660 10147979 ~ 10151913 (+)

Expression


Co-expression Network