G68774


Basic Information

Item Value
gene id G68774
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7054777 ~ 7058319 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85950
TCAGTGttcaaatccatatttatttcagatcatcattgcatatatttttttaaatgcattgtgatAAATGTATTGCTTAAGGGTAAAGATATGTCGATTATACTCCATGCACGAGCATGTTTACAGtgataacattttgtttaaaaagtctGCATCACAGTCGTTTTATGTTTCCTGATAAGATATTTGAAGAAGAAatctacacaacactacactagaAGCAAGAAGTATTTGCCTGGTATCTGTGGAAGTTTTTTGTGTCTtagcatattttcattttgcacaatttatacaaatgtctctcctttatataaaaataaatacatacagaccTCCTTAAAAGTGTGAAACTAGCATTGTTAACACTTGAGACCTGATTAGCAAATACCACAGGCAAAACACTCATTGTgtgtaatcaaaataaaaccccGATCACTCAGTTCAGGGCATCGGCTCGGTTATATAACCGCAGGGAGGGAAAATGCGTGGgatcaaaaaacacaattaaggtTCCTATGcaaatcacagacacacagggaaaactATGCAATCGTTTCTAATTGTTCCTAAAGAGGGGCTAATGTTAACGAGGTATTCACTGTCATGCAGGGTTGTTTCAAAGGCACTATCTGGGAACAGGCTGAGTGACATCCTAAGAGGGTTTGGGTTCGATCTAGTCCTCAAATCATCACCATACCATTGAACATGCAGTGAACACAGACGATTGTAAGACATACATGCACCGTCAACAGACACTGTTAAATAAGACTGCCTTCCCTTACCGGCCCCTGGACCTGCATTCCCATGCGAGAGGAATATAAAGACACATCCTGAGAGAACATTTCACAAATAGATGGCCTTTCTGCACAAATAGTCACATATTGAAACCTCTGGAAATCTAAAGGTATAGATTTTAACATACGTGTGTCTATAATGtctatttaaatcaatttctgGCACACATTGACATATCGATATACCTAAAACATAGGTCATGGTTTAAACTTTACACATACGTTCTTATACTTTAAAATTGACATCCTCTATGTTGACAAGATGTATTGGTGGGTTCTATTTTTGGCGAATCGCAGTGTATCCATGAAACCTATGTGCAGGATGCGTTTCTTTGTGGTTTGGGCTGTATGGGTGTCCAGAGGCCCTGGGAGACGCCACCCGCCACGGGGGAAGGAGGCTGGGAGAGCGGAGCATCACCACACATGGTCTCCACCAGGAAAGAGCCTGGAACTGTTCTCACTTCCAATGTGAAGCTGAATTCAGtcacatgcaaaaaaaaaaaaaaaaaaagaccggATGTCCAGCTTTCAAGTGGGGACAGAACCAGTCGGCCGGGAGCTCAGACAGACCCCGGGGGATACGGCACGATGCTCTCCAATGCATTCCTAAGCAGACAGGCCCACTAGGAGAGCTTGGAATGAAGTTCACACCCCAGAGAAGCAAAGTCCACTTGGgggttgttttgtgtgttgcttttttgtttgtttctttaagtaCAACCCTTCCCAGTGGTCCACACCAGACCATACTGCTCTTGCGTTCTAAGCACAGGTCCGACTGATCTTCAGAGGGTTCTGCACGTGCTCACACTTCCCAGCCTGTAGGGACGTctcagtttattaaaaatgcttgACCGGGGCGGCCGTCCGCTGCCCTCGGCCCGGAGTCTTCTGGGTTCAGTGCCAGCCGAGCCACGGAGGACCTCGTGATGCACATAGCCGATCCTAACGGGACAAGTTCACACGCTCCCCCAGCGCTGGAACACTGCCCACTGCAGCTGGCCCGTAAATACGAGGcactgcagctctccaggaacGGGGCCACACCGCTGACTGCAAAAGGGACACGGACACAGGGAAGAGGAAGGCAACTGGAGTCCATGAATTAACAACTCAAAGCAGAATAACAGGTGTGTTTATGCTACAGTACTCATTATTAATCACACGCTGCCCACGGAACAAACCAAGCCTTTCCTGTGCTTGTAGCCATGCGAGGTACCTGGTTCCAAATATTACAGTACATACAGAAAATATCAGagtaaatatagatttttctcATGCTATCGATaggtttattttacataaaaacaaggaCTATCAAATATCCTGCATAGCTCAGTCAAAAAAGGTTTTATaatgtgcaatgttttttctccccatCAGGCTCTACGGAGGTTTTAATATCTACAGAATGCTATCAAGACTACCgggaggaagaaaaggaaaatataataaaatcaaacaccCTGAAGTACGACCAGGAGGAGTCTTGATGCTGGTCTGTGAACTGCTGCTTTCCAATCATGTGCTGCTTTGAGTTCCATCTGATTAACTCAAATCCAATATAGTTTTAAAGCAACCATACCAGGACTGCATACAGGTTTTTGAGAAACACCGAAGTCTGCAAACTCCTACTATTTAATCCAGGTtggaatcaataaataaatacagtttactACAGCTAGCTTTTTGGGTCTGTCTCCCAAACATTGACGAACACAGTGCATACACTGCTTAAAAGAACTGGCCGGCAGTAGGGgagatacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcaaaaacagactggataggatccttgatcacttagttattaatggacaccaaacgagcacgatggggcgaataggctcctctcgactggacactttcttatgttcttatatcagAACTACGAAGCACAGATGTCACGATAGGAGGGATTGAAACTCAGACACCTGTATTAACAAAGGGGGGTTTCTAACGCTCTGCCCAGCTAGCCAAACAAACGTCTGTGAACAGTTTAAGAATTAGATTTGGAGACGTATTGTTGGGGGGGCATGCCAGCCACGGGTGCATctttaaatgcaatgtaaagAAGTGCAGTGAGTGGGTGCTGGTTGGAGAGAAGAACCCTCGAGTGCCAGGAAACCCCTGCCAGCCATTTAGCTTCCTAACGCCTTCAAGTCTTCACCTGgatggaaaaatataatatttcaccTTAAAACAGATTCCCTCACTCCAACCAAAACAGTAACACAAATAAGCACACATTACAGACACAGTAGACCTTGACCCCTCAGTATAAAACAAGCTGCCGCATAGCCCGACTGCAGGAGATGCTAGTTTTTGCTGTGCAGGTTGAAGAGTCTCTATGGCTTGTGTGGGCAGTTGCTGGTAGTCCTGGGAGCCCCCCCGCTCTCTCAGCACTGCCCAGATGTGCTTGACAGGGAGGCCTagtacccacaatgcaccacaTTTGCCTATGCCCACTCCTGGCACCCACAGCCCGGCCCCGAGGGCCTTCAGTCTGTAGTGTTAGGGGACCAGTCGTAAGGCATGTAGAGCACTTTGTAGCAGGGGGCGTTCAAGACCTCCTCCAGGCTGGACTTCTTGGGAGAGTCCCCCATGTGGTTTAATATCCAGTTCAGTAGCT

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85950 True 3543 lncRNA 0.45 1 7054777 7058319

Neighbor

gene id symbol gene type direction distance location
AMCG00014263 NA coding downstream 12061 7040731 ~ 7042716 (-)
AMCG00014258 epha3 coding downstream 166687 6887026 ~ 6888090 (-)
AMCG00014257 epha3,LOC107549902,LOC107676997 coding downstream 194235 6814181 ~ 6860542 (-)
AMCG00014256 NA coding downstream 299144 6752859 ~ 6755633 (-)
AMCG00014254 arl13b coding downstream 315510 6718319 ~ 6739267 (-)
AMCG00014264 NA coding upstream 3402 7061721 ~ 7061978 (-)
AMCG00014262 NA coding upstream 3743 7062062 ~ 7070724 (-)
AMCG00014265 NA coding upstream 18720 7077039 ~ 7093313 (-)
AMCG00014268 chmp2b,LOC108435168 coding upstream 181965 7240284 ~ 7254356 (-)
AMCG00014269 LOC108441420,LOC107582737,LOC107726519,LOC106592197 coding upstream 289133 7347452 ~ 7365740 (-)
G68773 glrx,LOC100698576,LOC103359009,LOC108424411,LOC103461279 non-coding downstream 471 7053931 ~ 7054306 (-)
G68767 NA non-coding downstream 8965 7044125 ~ 7045812 (-)
G68757 NA non-coding downstream 63910 6990603 ~ 6990867 (-)
G68724 NA non-coding downstream 374489 6680025 ~ 6680288 (-)
G68722 NA non-coding downstream 520076 6534480 ~ 6534701 (-)
G68826 NA non-coding upstream 229744 7288063 ~ 7288335 (-)
G68827 NA non-coding upstream 230617 7288936 ~ 7289437 (-)
G68829 NA non-coding upstream 282032 7340351 ~ 7340555 (-)
G68867 NA non-coding upstream 382181 7440500 ~ 7441172 (-)
G68874 NA non-coding upstream 397659 7455978 ~ 7459889 (-)
AMCG00014241 NA other downstream 946419 6059489 ~ 6108358 (-)
AMCG00014228 NA other downstream 1376278 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 3660023 3385757 ~ 3394754 (-)
G68088 NA other downstream 4225633 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 4401530 2641059 ~ 2653247 (-)
AMCG00014271 NA other upstream 319769 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 343833 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 355410 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 1076584 8134903 ~ 8139126 (-)
AMCG00014298 NA other upstream 1097613 8155932 ~ 8158590 (-)

Expression


Co-expression Network