G69023


Basic Information

Item Value
gene id G69023
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8133288 ~ 8136210 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86247
GGAACTGTTAACCCTGAGGAGTTTGTGGGAGTCGGGATACCAGGTCATTGTTTCTTATGAAGACGTAGAAGCAGAGCAACATCCAGAGTTATGGCCGGCGATCCCCTATTGGTGGGCAAACAAACTCGACGCCAAAGCTGTGGTTCAGTTTCTGCAGCAACGCAAGCATTCAGGACGCCCAGGGGGATTTTTTGTGGCTGGGCTGAACCTGACGGCAGACACGCAGTATATTGTGCGTCACCCTTCACAGTCCATCCGCACTCTCACGCTGCACAACTACGGCTATCTGGCAGCCTGGCTGCAGAAACAGAGCCCTGGGCCCGACCCAGGCTGCCTCAACATCATTGCTGGAGACTTCATCGGGTCGGTCCAGTTCTGCTCAATTGTCATATCTCTGAACAAGAAGCTGATACAGGCGGAACCAGAGCCCACTAACAACATgcattgaattaaatatgaaaaatacgACTGGAAATACACCTCCATGAGTATGGAAAAAAGcagaaactatatattttatttttatataagtatTGATGAACTCCAGTACACTGTTCTACTTTTCAGGTTTATTCCTACCAAGATCCtcataaatatgtatgatttGTCATGAATGAATGGGAGAAGTgtgcaatgaaaagaaaataatttaaaccactttattttgtatacaaaatacatgtataatctTTACTGTAAACTGCTTAgctattttatatacattaatctTTGAAAGGTTACAGCACAATGAAACGTAACCAGTATTTCACAAAGTCCCTGAATgtgggtaaaaaaacaaaaacacttaatgcatgaaaaataaataaatgtggaagAATTCTGATCACACTGATGTTGACAAGTGTGCCGATgaatcatccaattaacatgAGGCTTCAACACAGGGATTCTGGGTTACTAGTCGATGCCAGAGCTGCTAGTACTGGAATAGCTTCCTGTATCGCCCCCACGATGCATTGCTCATAATGACCTTGACGTCAGCGGCTCCTTCTTCTGGCAGAACCACCACCTCCTGCACCGTGGCCTCCTTGTACAGCCAGCTTGTTATGGTCTGTTTGGATGGGATGCAAAGCTGGACTGATACATTTGCCACCATAACATGTAAAGCGATGTGTTCTGCTTAGGGAAACACACTATGTCAGTCAACTAGGTGGAGCACAGCTACAGCAGTGTACCTATGAAAATAACCtgggtattttgttttcagtcgaTTCCAGGCTAGAGAGGGAAGAGAAGGGCAAACAGAAGACATTGACACAGGCCTAAAGCTGTGAAATTCAAATTCACTCTAGTCATGCAAAAACAGAATTGTTTACAAGACCTTCCAGAATTTCATGCTCAGAGTTGCTCCTTGTTTTACACAAAGCCATACTGCAGCAGCAGGGAAGTGTCCAGAGAAGGGCATCCACAATGGTCATACATTATCCTTGAGGTAAATTTGGCATAGGCTTTACAGGCAGGGTGGAAATAAAAGTTGTGCAAGATCATTGGTTACCTTAACTGAGCGCTGTTGAGATCCACCTTAATTGTCAGAATTTTCTTCCCCGTGGTTTTCAGGATGGCTTCTTCAATTCGGCTTCTCAGATCATCCAAGCCGTGCTCTTTCAGTGCTGATATGGCCAGTGTGTTTGGTTCAGTGGGCTGATAACTGAAACccaagcagaaaaacaaactaattttaaGCACACATACAGAAGGCTGTACTTTTCATTTGTAGCATTAGATCCTATGTTTGCTTAAAATGAATCAAGCAAAACCACacaaagctcctctggtttgatgtggtcgatgcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86247 True 1816 lncRNA 0.43 3 8133288 8136210

Neighbor

gene id symbol gene type direction distance location
AMCG00014294 NA coding upstream 1495 8128204 ~ 8131793 (+)
AMCG00014292 NA coding upstream 6193 8120375 ~ 8127095 (+)
AMCG00014290 NA coding upstream 130010 8000090 ~ 8003278 (+)
AMCG00014289 tspan7,tspan7b,LOC107704418,LOC107745974,LOC107593043,LOC107586946 coding upstream 277937 7845556 ~ 7855351 (+)
AMCG00014288 NA coding upstream 337906 7783729 ~ 7795382 (+)
AMCG00014293 NA coding downstream 24198 8160408 ~ 8161280 (+)
AMCG00014299 slc9a7,LOC107673530 coding downstream 68612 8204822 ~ 8250935 (+)
AMCG00014306 cyfip1 coding downstream 127226 8263436 ~ 8321739 (+)
AMCG00014307 LOC103356925 coding downstream 206791 8343001 ~ 8382284 (+)
AMCG00014308 herc2,LOC102311645,LOC101466252,LOC102196790 coding downstream 249955 8386165 ~ 8401359 (+)
G69006 NA non-coding upstream 118285 8014744 ~ 8015003 (+)
G68982 NA non-coding upstream 258546 7874527 ~ 7874742 (+)
G68904 NA non-coding upstream 506884 7625988 ~ 7626404 (+)
G68771 NA non-coding upstream 1074969 7056707 ~ 7058319 (+)
G68738 NA non-coding upstream 1389177 6743863 ~ 6744111 (+)
G69206 NA non-coding downstream 598113 8734323 ~ 8735939 (+)
G69232 NA non-coding downstream 754376 8890586 ~ 8890834 (+)
G69326 NA non-coding downstream 1230327 9366537 ~ 9376350 (+)
G69384 NA non-coding downstream 1765240 9901450 ~ 9910048 (+)
G69400 NA non-coding downstream 1838214 9974424 ~ 10028351 (+)
AMCG00014272 tbc1d23 other upstream 650728 7464503 ~ 7482560 (+)
G68848 NA other upstream 716694 7413640 ~ 7416594 (+)
G68830 NA other upstream 783821 7346195 ~ 7349467 (+)
G68475 NA other upstream 3481324 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 4001570 4127476 ~ 4131718 (+)
G69406 tgfbrap1,LOC102780916 other downstream 1866848 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 2011769 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 5110099 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 5519028 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 6053354 14189564 ~ 14205014 (+)

Expression


Co-expression Network