G69233


Basic Information

Item Value
gene id G69233
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8890556 ~ 8890839 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86493
gtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagatgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcatatggggctgcgtagctgcagaccagtcagggcgcccatgctgacccctgtccactgccgaaagcgcctacaatgggcacgtgagcatcagaactggaccatggagcaatggaagaaggtggcc

Function

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86493 True 284 lncRNA 0.56 1 8890556 8890839

Neighbor

gene id symbol gene type direction distance location
AMCG00014311 NA coding downstream 132375 8731578 ~ 8758181 (-)
AMCG00014310 gabrg3,LOC107711006 coding downstream 275555 8601162 ~ 8615001 (-)
AMCG00014312 NA coding downstream 351507 8536937 ~ 8539049 (-)
AMCG00014304 NA coding downstream 556104 8330056 ~ 8334452 (-)
AMCG00014305 nipa2 coding downstream 564136 8322434 ~ 8326420 (-)
AMCG00014317 cnga3a,LOC108441138 coding upstream 139266 9030105 ~ 9040045 (-)
AMCG00014319 NA coding upstream 156465 9047304 ~ 9050642 (-)
AMCG00014320 NA coding upstream 170194 9061033 ~ 9085213 (-)
AMCG00014318 NA coding upstream 240576 9131415 ~ 9135387 (-)
AMCG00014326 NA coding upstream 253699 9144538 ~ 9147337 (-)
G69086 NA non-coding downstream 639995 8226494 ~ 8250561 (-)
G68981 NA non-coding downstream 1016198 7874153 ~ 7874358 (-)
G68905 NA non-coding downstream 1264181 7625985 ~ 7626375 (-)
G68875 NA non-coding downstream 1424894 7465409 ~ 7465662 (-)
G68874 NA non-coding downstream 1430667 7455978 ~ 7459889 (-)
G69250 NA non-coding upstream 107587 8998426 ~ 8998626 (-)
G69352 dcaf6 non-coding upstream 458949 9349788 ~ 9355238 (-)
G69372 NA non-coding upstream 698985 9589824 ~ 9590081 (-)
G69373 NA non-coding upstream 700337 9591176 ~ 9591381 (-)
G69382 NA non-coding upstream 1003887 9894726 ~ 9895580 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 506332 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 731966 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 751430 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 1467265 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 1478666 7402152 ~ 7411890 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 414400 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 1110295 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 1167258 10058097 ~ 10061230 (-)
G69537 NA other upstream 1905877 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 2234190 11125029 ~ 11137086 (-)

Expression


Co-expression Network