G69427


Basic Information

Item Value
gene id G69427
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10053737 ~ 10054275 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86727
aattaatatctgAACAAAGTAACCTAATCTAGGAAGCCTCAATGTGTGAGTAAGtgtaaattgttttataaaatgactTCAGAAATCAGTTTCCAGCTTAGTTTGTATTTGcttctttttgaaaaacaagCTTTAAATGTGAGTCTTGAGAAAGGTGGTAAATGGAATTTGGGGGgaatatgaaatacattgtgtgtgaCAGCATGCACATCATCATGAGCAAAAGTACACTTCAATATGGAGAGAATGAAGGTCACAGAAACTGCTTAAGTGGTTTCATCTGGTTCAGTTCAGCAAAGCTTGGAATCATGAGTTttgatataaatatttgttaaatcttgtggttgtattttggtttaaagACTTAATGAGAatcatgcattgttttttataaacTCTGAAATGGCTGGGTAAGGACTTCAAAATTAAATGGTATAATTTAAAGCTTTTGTAGTAATGTAAACACATCTTAACAAGCAGTTTCATCTGCTGACCCTTtccttatttctgtgtttgtgattttgaaTTGGCAATCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86727 True 539 lncRNA 0.33 1 10053737 10054275

Neighbor

gene id symbol gene type direction distance location
AMCG00014341 fhl2,fhl2a,LOC107716797,LOC107676452,LOC107688730 coding downstream 10171 10027652 ~ 10043566 (-)
AMCG00014332 NA coding downstream 581478 9467324 ~ 9472259 (-)
AMCG00014333 inpp4a coding downstream 635501 9373456 ~ 9418236 (-)
AMCG00014331 NA coding downstream 686701 9358847 ~ 9367036 (-)
AMCG00014325 NA coding downstream 825110 9216869 ~ 9228627 (-)
AMCG00014346 uxs1,LOC107721615,LOC107551074,LOC107676432 coding upstream 138354 10192629 ~ 10197751 (-)
AMCG00014348 NA coding upstream 186731 10241006 ~ 10256375 (-)
AMCG00014349 NA coding upstream 245728 10300003 ~ 10301361 (-)
AMCG00014347 NA coding upstream 263969 10318244 ~ 10328231 (-)
AMCG00014354 NA coding upstream 471338 10525613 ~ 10526969 (-)
G69396 NA non-coding downstream 118339 9935175 ~ 9935398 (-)
G69394 NA non-coding downstream 136402 9916845 ~ 9917335 (-)
G69391 NA non-coding downstream 141716 9901357 ~ 9912021 (-)
G69382 NA non-coding downstream 158157 9894726 ~ 9895580 (-)
G69373 NA non-coding downstream 462356 9591176 ~ 9591381 (-)
G69483 NA non-coding upstream 283612 10337887 ~ 10340946 (-)
G69495 NA non-coding upstream 365905 10420180 ~ 10479009 (-)
G69523 NA non-coding upstream 626795 10681070 ~ 10681292 (-)
G69528 NA non-coding upstream 685141 10739416 ~ 10739930 (-)
G69530 NA non-coding upstream 712325 10766600 ~ 10768258 (-)
AMCG00014340 NA other downstream 35986 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 736570 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 1669513 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 1895147 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 1914611 8134903 ~ 8139126 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 3822 10058097 ~ 10061230 (-)
G69537 NA other upstream 742441 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 1070754 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 1605736 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 3033333 13087608 ~ 13133751 (-)

Expression


Co-expression Network