G69428


Basic Information

Item Value
gene id G69428
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10054491 ~ 10054711 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86728
gacAAATATAAATCATGACTTATACCTTTCTTTTACTTCAAATCTGTGGTATTTGCCCTGTGTTTTGTAACacagtattatgtattatgctgcaattattttgttttggtatctATTGTGTCATTGTGTAAAAGATTTCAGATATATTATGTCGGTTGGATGGATATGTATTGGTGCAGTGagttttagttgtattttaggctatttacagtattttcgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86728 True 221 lncRNA 0.30 1 10054491 10054711

Neighbor

gene id symbol gene type direction distance location
AMCG00014338 gpr45,si:dkeyp-118h3.5,LOC106581986,LOC107602888,LOC107688775 coding upstream 59820 9993673 ~ 9994671 (+)
AMCG00014335 NA coding upstream 72898 9959233 ~ 9981593 (+)
AMCG00014334 LOC107748535,LOC108247996,LOC104928562,LOC103473625 coding upstream 137702 9914125 ~ 9916789 (+)
AMCG00014337 NA coding upstream 146229 9841023 ~ 9908262 (+)
AMCG00014336 NA coding upstream 245611 9803957 ~ 9808880 (+)
AMCG00014342 nck2b coding downstream 70443 10125154 ~ 10145702 (+)
AMCG00014344 NA coding downstream 101754 10156465 ~ 10162165 (+)
AMCG00014352 NA coding downstream 174289 10229000 ~ 10242261 (+)
AMCG00014351 LOC107688773,LOC102224404,LOC106959393,LOC103459619,LOC108266990,LOC107099852 coding downstream 253711 10308422 ~ 10318002 (+)
AMCG00014350 NA coding downstream 298134 10352845 ~ 10380421 (+)
G69400 NA non-coding upstream 26140 9974424 ~ 10028351 (+)
G69384 NA non-coding upstream 144443 9901450 ~ 9910048 (+)
G69326 NA non-coding upstream 678141 9366537 ~ 9376350 (+)
G69232 NA non-coding upstream 1163657 8890586 ~ 8890834 (+)
G69206 NA non-coding upstream 1318552 8734323 ~ 8735939 (+)
G69431 NA non-coding downstream 666 10055377 ~ 10055733 (+)
G69457 NA non-coding downstream 168960 10223671 ~ 10224035 (+)
G69499 NA non-coding downstream 438436 10493147 ~ 10493396 (+)
G69540 NA non-coding downstream 782493 10837204 ~ 10838230 (+)
G69556 NA non-coding downstream 904615 10959326 ~ 10961929 (+)
G69406 tgfbrap1,LOC102780916 other upstream 45843 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 2571931 7464503 ~ 7482560 (+)
G68848 NA other upstream 2637897 7413640 ~ 7416594 (+)
G68830 NA other upstream 2705024 7346195 ~ 7349467 (+)
G68475 NA other upstream 5402527 4649200 ~ 4651964 (+)
AMCG00014345 NA other downstream 93268 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 3191598 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 3600527 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 4134853 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 4247736 14302447 ~ 14356868 (+)

Expression


Co-expression Network