G69457


Basic Information

Item Value
gene id G69457
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10223671 ~ 10224035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86759
ccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcagattgctgaaaaagttaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcacctacaatgggcacgtgagcatcagaactggaccacggagcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86759 True 365 lncRNA 0.56 1 10223671 10224035

Neighbor

gene id symbol gene type direction distance location
AMCG00014344 NA coding upstream 61506 10156465 ~ 10162165 (+)
AMCG00014342 nck2b coding upstream 77969 10125154 ~ 10145702 (+)
AMCG00014343 NA coding upstream 152070 10015503 ~ 10071601 (+)
AMCG00014338 gpr45,si:dkeyp-118h3.5,LOC106581986,LOC107602888,LOC107688775 coding upstream 229000 9993673 ~ 9994671 (+)
AMCG00014335 NA coding upstream 242078 9959233 ~ 9981593 (+)
AMCG00014352 NA coding downstream 4965 10229000 ~ 10242261 (+)
AMCG00014351 LOC107688773,LOC102224404,LOC106959393,LOC103459619,LOC108266990,LOC107099852 coding downstream 84387 10308422 ~ 10318002 (+)
AMCG00014350 NA coding downstream 128810 10352845 ~ 10380421 (+)
AMCG00014357 NA coding downstream 441358 10665393 ~ 10671738 (+)
AMCG00014356 NA coding downstream 497049 10721084 ~ 10754147 (+)
G69431 NA non-coding upstream 167938 10055377 ~ 10055733 (+)
G69428 NA non-coding upstream 168960 10054491 ~ 10054711 (+)
G69400 NA non-coding upstream 195320 9974424 ~ 10028351 (+)
G69384 NA non-coding upstream 313623 9901450 ~ 9910048 (+)
G69326 NA non-coding upstream 847321 9366537 ~ 9376350 (+)
G69499 NA non-coding downstream 269112 10493147 ~ 10493396 (+)
G69540 NA non-coding downstream 613169 10837204 ~ 10838230 (+)
G69556 NA non-coding downstream 735291 10959326 ~ 10961929 (+)
G69610 NA non-coding downstream 997035 11221070 ~ 11221274 (+)
G69681 NA non-coding downstream 1417048 11641083 ~ 11641452 (+)
AMCG00014345 NA other upstream 71758 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 215023 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 2741111 7464503 ~ 7482560 (+)
G68848 NA other upstream 2807077 7413640 ~ 7416594 (+)
G68830 NA other upstream 2874204 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 3022274 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 3431203 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 3965529 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 4078412 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 4997879 15221914 ~ 15242333 (+)

Expression


Co-expression Network