G69483


Basic Information

Item Value
gene id G69483
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10337887 ~ 10340946 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86793
attttttttaattatactatttatttttatttggtctaaAAACCAAATAACTGAATGTGCAGCTATAAAATaaatttttttctctctatacaTATCTTGACATATCTTATACTACATTGGTTCTGCCTTaagtaattaaatgttaaatacattaattgaaaattaaGTGACACAAATAATTTTGATGATTCTGAGAATGTTGATAGAGAAGGGTGACATtcataaatataagaaaaatattatGCTGCATATTCTACAAGAAAACGAAGTTACTAACTCTTATTTCTAAATTCATTGCAGGAACTGTAAGTCAATACACAAATGAAACTGTAACAAACAGAGGTTCATCTGAACATACAAAAGAAATAATTTTCTTCATATGGTCCATTGGTCGCTATGGTCTCCTTGCAGTATTATTGGTGGTCTTTGTGGGCGTTTCATTCGCAGACTGCATACTAAAATCTAAAGAAAAAAGAATATCGCAAGACATCAATAATGGACAGAAAAGGaGAAATTCCTCAATCCAGAGAAGTCAGTCTGGACGGTTTTCCGAGGCACCATCTGAGGAAGCTTATTATGAGTCTATCTAAATGTTTACATGGATTCCTCTATTTCCTAACtgattattgtattacatttactAAAAGCAAGCATTTGCAAAATTGATTGTAGTTTTTTGGATTCACCAGTTACAGCACCACTCCATattcttactccttgatagaCAGTGTTGCTGAGTCCACGACTGCGGCAAAGACTGAGAAGACAAAACCAGCCAACTCTGATCGCATCACATTTGCATCACTAGAATCATGCCACTTGACCACGCTGGTATCTATAAATAGGTTAATgcagtaatgtattttacagtgtgTGATTTTGCGAATCAAATGTCCTTTGCAAGGTAAATATTGACCTGGCTTTTGTATAACag

Function

GO: NA

KEGG:

id description
ko04380 Osteoclast differentiation

RNA

RNA id representative length rna type GC content exon number start site end site
TU86793 True 934 lncRNA 0.33 5 10337887 10340946

Neighbor

gene id symbol gene type direction distance location
AMCG00014347 NA coding downstream 9656 10318244 ~ 10328231 (-)
AMCG00014349 NA coding downstream 36526 10300003 ~ 10301361 (-)
AMCG00014348 NA coding downstream 81512 10241006 ~ 10256375 (-)
AMCG00014346 uxs1,LOC107721615,LOC107551074,LOC107676432 coding downstream 140136 10192629 ~ 10197751 (-)
AMCG00014341 fhl2,fhl2a,LOC107716797,LOC107676452,LOC107688730 coding downstream 294321 10027652 ~ 10043566 (-)
AMCG00014354 NA coding upstream 184667 10525613 ~ 10526969 (-)
AMCG00014353 NA coding upstream 311333 10652279 ~ 10708018 (-)
AMCG00014358 NA coding upstream 559062 10900008 ~ 10903196 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding upstream 620303 10961249 ~ 10974117 (-)
AMCG00014360 NA coding upstream 633519 10974465 ~ 10991144 (-)
G69427 NA non-coding downstream 283612 10053737 ~ 10054275 (-)
G69396 NA non-coding downstream 402489 9935175 ~ 9935398 (-)
G69394 NA non-coding downstream 420552 9916845 ~ 9917335 (-)
G69391 NA non-coding downstream 425866 9901357 ~ 9912021 (-)
G69382 NA non-coding downstream 442307 9894726 ~ 9895580 (-)
G69495 NA non-coding upstream 79234 10420180 ~ 10479009 (-)
G69523 NA non-coding upstream 340124 10681070 ~ 10681292 (-)
G69528 NA non-coding upstream 398470 10739416 ~ 10739930 (-)
G69530 NA non-coding upstream 425654 10766600 ~ 10768258 (-)
G69531 NA non-coding upstream 432237 10773183 ~ 10773422 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 276657 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 320136 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1020720 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 1953663 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 2179297 8155932 ~ 8158590 (-)
G69537 NA other upstream 455770 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 784083 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 1319065 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 2746662 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 6381127 16722073 ~ 16737877 (-)

Expression


Co-expression Network