G69759


Basic Information

Item Value
gene id G69759
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11879097 ~ 11880456 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU87141
ACCTGTTACTTCATTTATTTGATCAAACTTAACATTAGacttaatgttaaaaatattattgttaactTCATGTTATTTAGTCTCTTCTGTCATATTTAGAGAGAACCCAAGTTCTGATTTGCATATGagaaatattttgtatcaatgtaaCATGTACACGCCTTTTAGTTTTTCAAACCAGTAAAAAAGGTGGCTTAGGCAATCAGGAAGCTATTCTTCACACAAAATAGCCTTCTGAACACTGAGACCTGATTAATCCCCAGCCTCCCAGAGTAAAAGGTATTCATCTTCTGAGTCTGAAACACCCTGTATTGagagagcacagacacacaacacacttaTCAAAAGGTATAATTGTGCTTACATTTGCAGACACAAAGCTTCAAAAGCAGTACATTTGTGCTTACAAAAACATTCAGATCACTATAGACATTCTGCAAAATCAAATAGGgtaaaatgcttttatatacGTTTTTGTTATGCGTGTatctatttacattaaaatgcttttatgaaataaaaaattgtattgatATTAAGCATGCTCAGCATTGATTGCTGTTTTTGCACTACACTACCACTTTAAACCACCAGGGTCCTCTAAACTCCATTCTTGGAATCACtggaattattaatattagtatttatttctggGCAGATCCACGTTTCATTGGCAACGAATAGTTTAtagaagcattacaaaagtgcagtcatacaaatcaatacaaaattcaatttaagcattacaacAGTGCAGtaatataatcaatacaaagtacaatttaaacattacaaaaatgcagtcgtaaaatgaatataaaatagaCAGAAATGACAAGAACATCCCATAGACACAGCTGCTAATACAgaattaatataacattttgtagTTTCTGCAGGTACAACATGATAGATCAATTGCACCTGCGGATGACCTTGTGGTTCAGAACTTGACGAAGTGTTAGTTGTCACCAAGTGCTTTGAACCAAGAACCTCCATACAGTCCCCAGGTCTGGATTAAACATGTTCTCAATTGCAGCAAACTCCAAATCATGACTGCTGACCCCTACATGTTCCTGGTTTATTGTGCTAAATAGATTGTTGTCAGCAATTGCATTGTctaagcaaatatatattttcattagcGAATAAGACACCACAGCAAAAAACAgcatataacaataataatatgtaagaTAATGTTGGTTCGTCCGCTTCCCTCCTTTGGCAAGTCTTTCATCTTTCTCCCCCTTTTCTGAACTatctgaggaaaaaataaatacaaaacatataataatcACTCGCCCTGTTTGTTAACTAACTTTCCAAATGTAAAGCTTCGAATGCACTGGCGCTTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87141 True 1360 lncRNA 0.34 1 11879097 11880456

Neighbor

gene id symbol gene type direction distance location
AMCG00014385 NA coding downstream 11568 11866611 ~ 11867529 (-)
AMCG00014379 spryd7,LOC108430519,LOC107600395,LOC108266652 coding downstream 123636 11750191 ~ 11755461 (-)
AMCG00014380 rcbtb1 coding downstream 156644 11697189 ~ 11722453 (-)
AMCG00014372 atp11a,LOC106575518 coding downstream 376496 11459613 ~ 11502601 (-)
AMCG00014367 ankrd10,LOC106586677 coding downstream 703655 11167640 ~ 11175442 (-)
AMCG00014386 LOC106575503 coding upstream 2039 11882495 ~ 11891473 (-)
AMCG00014384 NA coding upstream 13304 11893760 ~ 11895883 (-)
AMCG00014390 il1rapl1,LOC100693228,LOC101468878,LOC102196907,LOC101172314,LOC107381071 coding upstream 103617 11984073 ~ 12003809 (-)
AMCG00014391 il1rapl1,LOC106575569,LOC106574938,LOC105023742 coding upstream 316583 12197039 ~ 12199190 (-)
AMCG00014389 NA coding upstream 841286 12721742 ~ 12726644 (-)
G69743 NA non-coding downstream 107704 11769690 ~ 11771393 (-)
G69539 NA non-coding downstream 1058025 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 1082908 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 1085951 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 1101656 10777051 ~ 10777441 (-)
G69849 NA non-coding upstream 1089797 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1204907 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 1421468 13301924 ~ 13302379 (-)
G69973 NA non-coding upstream 1423970 13304426 ~ 13375879 (-)
G70034 NA non-coding upstream 1742659 13623115 ~ 13623381 (-)
AMCG00014374 NA other downstream 211560 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 742011 11125029 ~ 11137086 (-)
G69537 NA other downstream 1080950 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1817867 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1861346 10001134 ~ 10017751 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1207152 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 4841617 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 5566412 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 5708811 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 6110195 17990651 ~ 18022095 (-)

Expression


Co-expression Network