G70094


Basic Information

Item Value
gene id G70094
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13770177 ~ 13772272 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU87572
CTGACCTGCTCTGCTTCTACTTTGCAGAAATGTTGGCATTCCCCATTGTTGTTTTCACAGAGCTTCGGAATGACGATTTCACAGTTTCTCCCTTGATAGCCTGTTCTGCAGAAGCACGTGTATGCTCCTATTCCATCCTGGCACTGACCAGCATTGAGACATGGTGCAGATGTGCAGGCATCGCCGTcaaaatatatattccagaaGTCATCCGTTTTCTTTTGGTCTTCAAACACCTCCCTTGCTTCTTCGTAACTGCACTTCTCTTCGTAGCATTCTCTCTCTAGGTTTCCTCGTCTTAACTCTTCGAAAGGACTGTTAGCCCTCCGGTGTCTGCTGAAGACCTGGCTGGCCCACTCTTTCCCCAGGAACACTGAATCAA

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process
GO:0004806 triglyceride lipase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU87572 True 382 lncRNA 0.48 4 13770177 13772272

Neighbor

gene id symbol gene type direction distance location
AMCG00014428 NA coding downstream 27358 13728703 ~ 13742819 (-)
AMCG00014429 NA coding downstream 60890 13697335 ~ 13709287 (-)
AMCG00014430 NA coding downstream 233808 13531195 ~ 13536369 (-)
AMCG00014438 NA coding downstream 242575 13498726 ~ 13527602 (-)
AMCG00014432 NA coding downstream 282564 13478348 ~ 13487613 (-)
AMCG00014436 pcid2 coding upstream 12643 13784915 ~ 13790135 (-)
AMCG00014435 NA coding upstream 56183 13828455 ~ 13846485 (-)
AMCG00014431 adprhl1 coding upstream 80890 13853162 ~ 13864850 (-)
AMCG00014433 dcnl2,dcun1d2,dcun1d2a,LOC105908025,LOC108426072 coding upstream 94371 13866643 ~ 13882123 (-)
AMCG00014450 NA coding upstream 151327 13923599 ~ 13929423 (-)
G70091 NA non-coding downstream 8757 13759226 ~ 13761420 (-)
G70063 NA non-coding downstream 73206 13694757 ~ 13696971 (-)
G70034 NA non-coding downstream 146796 13623115 ~ 13623381 (-)
G69973 NA non-coding downstream 394298 13304426 ~ 13375879 (-)
G69950 NA non-coding downstream 467798 13301924 ~ 13302379 (-)
G70169 NA non-coding upstream 147249 13919521 ~ 13921330 (-)
G70238 NA non-coding upstream 327092 14099364 ~ 14102156 (-)
G70315 NA non-coding upstream 1273580 15045852 ~ 15059774 (-)
G70346 NA non-coding upstream 1466531 15238803 ~ 15242333 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding upstream 1601966 15374238 ~ 15376774 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 636426 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 2102640 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2633091 11125029 ~ 11137086 (-)
G69537 NA other downstream 2972030 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 3708947 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 2949801 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 3674596 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 3816995 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 4218379 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 5429531 19201803 ~ 19203567 (-)

Expression


Co-expression Network