G70271


Basic Information

Item Value
gene id G70271
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14466704 ~ 14467744 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU87784
AATAGCTTCCAAACTGTCTTGTCCTGATGGAAGAAATATAACTACATGAAAATGATCCCCTGTGTTTTCAGCTCCTGCATTAGATGCTCACTTGAAGGTCACTTAGTATTGGCTAAGAATCAGGATTGTCGGGATACTGAGATTGTGCATGTGCTGTCTGGTTCACACTCTGCTCGTCTCGTGTAATCTTCAGTGCATGGCCCAACCTCGGCTGTCTTCCGCGATTCCACGCGGCAGGCAACGGTGCTTCTTCTCTCTTTCCGTGTTTCAACAAACAGGCAAGACAAAACTTTCAATATCATGTCTTACACACCTTTTCATGTATTCCTCTAGTCTGCCGTGTTGAGATTAAAAGGTGCTGTACAAAGGAGAACTATCAAGCGTTAAGCTCCTCCTGATCTCAAACTTGTCTTCTTCTATTACTCCAGCCTACCAAAACAGAGGTGACAACAGCCAACACACTCAATAAGCATTTGATATTTTCACGGTCGATCATTTTTCCTTAAAGTGActgcaatggctttttttttttttttttttgtcctttgaAGGGGTGTGGTAAGCAGGTTATTGTCCTGTTTATGGTTTGTTTGATTACTATTTCAATTactataatgttttaaataacctTGTATCGGCAAACAACAATGCTTTACAAAACACTTGATTAGGTTTGtgtcagttttaaaaaacattttatacatgttttcgTGTTCGATTTAGTTTTTGGCATACGAATAGGAAACTCAGTTTGGAATAACTTGTAGATCTTTGCTCCTCTCATATTCTTCTCTATAACAGTCTAGCCACTGTTATACTGGTGTAACTCCCACTACTGTTTTATTcacataataaacataacatgCTGTGCACTAAGTGATGTTTCTGTGAGACCATCTTTGAAATTCTGCATTGTTATGAAACATCACTGAGGTCAGTATCTCCGATCTATGAATAAACTCACTCTTACCCAGAGGAACTGTATTCAGCGTTTCAACACTTCTTCACTTATGTGAAATGGTAGCCTTCAAAACCCAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87784 True 1041 lncRNA 0.39 1 14466704 14467744

Neighbor

gene id symbol gene type direction distance location
AMCG00014457 tmem47 coding upstream 4596 14452526 ~ 14462108 (+)
AMCG00014459 NA coding upstream 86685 14371145 ~ 14380019 (+)
AMCG00014460 NA coding upstream 225209 14238011 ~ 14241495 (+)
AMCG00014458 NA coding upstream 231292 14223516 ~ 14235412 (+)
AMCG00014447 NA coding upstream 303382 14162125 ~ 14163322 (+)
AMCG00014462 dmd,LOC106574978 coding downstream 216989 14684733 ~ 14692283 (+)
AMCG00014465 NA coding downstream 252150 14719894 ~ 14750619 (+)
AMCG00014463 NA coding downstream 299743 14767487 ~ 14811135 (+)
AMCG00014466 NA coding downstream 356048 14823792 ~ 14828121 (+)
AMCG00014467 NA coding downstream 452669 14920413 ~ 14989067 (+)
G70221 NA non-coding upstream 295692 14167446 ~ 14171012 (+)
G70054 NA non-coding upstream 769833 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 1086300 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 1131519 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 1484270 12980259 ~ 12982434 (+)
G70286 NA non-coding downstream 712101 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 882898 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 983034 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 1032814 15500558 ~ 15500832 (+)
G70415 NA non-coding downstream 1038070 15505814 ~ 15506048 (+)
AMCG00014461 NA other upstream 109836 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 261690 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 777516 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 1214972 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 4314791 10147979 ~ 10151913 (+)
AMCG00014470 NA other downstream 754170 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 1207887 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 1661735 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 1997877 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 2897054 17364798 ~ 17487050 (+)

Expression


Co-expression Network