G70458


Basic Information

Item Value
gene id G70458
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15643619 ~ 15644914 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88034
acaattcaacagcacttgatgtatttttattaaaagctGGCAACAGTTCTGCTGTGACAATATCAGGaatgctgcaaaataaaactaagaatgttttttttctttttctatgtaTTGTAAAAGAAGGCACTCTCAGTTCTAATACAGCATTATAGTTATGATCTTTCACTTGATTAATTTGCTTGATAATCCTTTCTGGTTAATGTGAACGTAGTATTCATGGAAAATGTCTTTTATGAAATGCACCATTGGTCTCCAAAgtattaaacatatttctgcTTTCTGTCAAAGATTCCAGTGGATTTTAATGTTCAGCTATGTCTTAATGATACCTTAACGATATTATAAGGATTTTTGAAGTGCACATGACaaagaccaaaataaacacatttccatagATTTAATATGCTGctaatttcaaataataaaaacaatattacttttttcaacCACAAAGCACTGTGTAATCACAACAAGCGTTGACTGTATTTTATAGAAACTCTTAAATGAGCAAACTGACaacacctttaaaacaaaaatgtatatcagtGCTCCAGACTTGGTGAGAGAGTGAGGTGTGAGTGAGagggtgtgcatgtgtgtgtttgtgttcactAGATTCTTAGGCGTGATTGTTATTCACTGATCACCCCATGGAGTGTGAGCCAGTCAGGGGAGTGTGAGCCAGGTGCCGAGGGTGCAGGTGTGAGCCGGGACAGTGTGCTGCTGGACTCATCACGCCCTCTTCATTCCACGGGCCATGAGGCAAGCGAACACCGTCATCACCATCTTGGGTTTCACCTCCACCAGGTCCTCAGGCAGGGCGTACACTCGGGCACCGATCTTTCTTGCCATAGAAATGgcatatGGCATTGTTGAGTTTCTCTTCCTCAGTCAGATCCTCTGTCTTCAACAGATCATATCTGATTGAGCCAGGCTGGATGGCATCAATCAGGTCCAGGACTGGCATACTGCTGCTTATCTGCCCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88034 True 991 lncRNA 0.40 2 15643619 15644914

Neighbor

gene id symbol gene type direction distance location
AMCG00014491 NA coding downstream 16511 15619162 ~ 15627108 (-)
AMCG00014493 NA coding downstream 48046 15590989 ~ 15595573 (-)
AMCG00014492 NA coding downstream 79618 15526728 ~ 15564001 (-)
AMCG00014485 nudt15 coding downstream 272494 15370180 ~ 15371125 (-)
AMCG00014484 NA coding downstream 280689 15350804 ~ 15362930 (-)
AMCG00014499 cnot11,LOC106582250 coding upstream 28112 15673026 ~ 15676127 (-)
AMCG00014498 NA coding upstream 34881 15679795 ~ 15697711 (-)
AMCG00014497 NA coding upstream 104420 15749334 ~ 15751165 (-)
AMCG00014511 rdx,LOC108434698,LOC107757412,LOC107588847,LOC108258936 coding upstream 328439 15973353 ~ 15993156 (-)
AMCG00014510 NA coding upstream 396319 16041233 ~ 16067562 (-)
G70420 NA non-coding downstream 118605 15522520 ~ 15525014 (-)
G70425 NA non-coding downstream 137108 15506304 ~ 15506511 (-)
G70407 NA non-coding downstream 256919 15383633 ~ 15386700 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding downstream 266845 15374238 ~ 15376774 (-)
G70346 NA non-coding downstream 401286 15238803 ~ 15242333 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding upstream 55294 15700208 ~ 15703314 (-)
G70660 NA non-coding upstream 567630 16212544 ~ 16214127 (-)
G70679 NA non-coding upstream 636771 16281685 ~ 16281899 (-)
G70689 NA non-coding upstream 721210 16366124 ~ 16369464 (-)
G70731 NA non-coding upstream 820865 16465779 ~ 16469228 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 2509868 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 3976082 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 4506533 11125029 ~ 11137086 (-)
G69537 NA other downstream 4845472 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 5582389 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 1077159 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 1801954 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 1944353 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 2345737 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 3556889 19201803 ~ 19203567 (-)

Expression


Co-expression Network