G70496


Basic Information

Item Value
gene id G70496
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15727434 ~ 15728917 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88084
tctatttttgaaagcattcttactttacagcattttttcacatctgcctaaaacgtttgcacagtgcTGTACTTCCAAAGCAGAACTGCTAGGTGGATCGTtcaatgtacaaataaaatacatttttgaaaattatCTGTCAGATTAATAATAGCAGACCACCAAGTCctgaataaaacaagaacaGCCACTCTTAGTGAGTTGTCAGTTGCTGTACTGTAAATAAGATTGTGTTACACTCAGAGTTCATTACATCATTGGTTCAGAGACAAAACATAGAATAGAATTACACTGAGTCACTTCACAGAACTAAGCATAAGGGGAATTAACTGGAATATAATTACCCCAGGTGGATCAGGTTTCACtgtatcaaaacataatataaatcaaAGTGTGCTTCCTTACTTGTGTTCTGTGGCGCCATAGCTGTGTTTTAACATCCCTGTAAGGAGGCAACTCTTTAAACAGTGCTGTTTGTACTAAAGGACAAATGTTCTCAATGAGAGAGAACTATACAGCATTACTGTGAACAGAGCCATTGTGACAACAGTGCAGTGGGCATGACAAATATGTAGCCGTACTTTACAGCACCATTCCGCGGGAGCTCAGCATTAATCTCATTTGCGAGCGCTATACATAATCTTGGAGACACATGGATGACGTTATTGTCAGTGGCAGTAGACTGCATTACTAAATTGGTTAGTCAGCCTAAATTATACAAGTCCTCATTCATACAGGAAGTGCAGAGAGTTTGAAAATGATGACATGGCTGTGTGAAAGAGATGCATCACATAACTATGCGTCTACATAGCTTATGCTTCAGCTTACATACTAGAGAGCCACCTTGGAACACTCTGCCTGTTGAAATCGATAGCTTGCGCTGTGCCCTCTGTTTTAAAGAGAGCACTTTCCAGTAagaacacaaattaacaaaGATACTGTGATTCCCATTTGATGATTTAATGAAGCTTGGGACTTGtaatcttcattttttttttttcttcagaaattcAAAGCTTGGAATGTAGGACTGTGTTGAACACGGCTCAAATACTAcaactacagaaataaataatggcatGCAAGAATTGAATAAATCTATTCTGACGTGAGAACTGACTTGTCTGAGCTGGTATTAATCCTTTGAAGCTCACAGttttacacagacacagcagAGATGCATTTCACCCTCTGCATAAGTTTATGATTCTGGGGAGATCAAAGGTATCTGTGTTTCAGTACAGCTAACTAAGTctccttgaaaaaataaaaatataggaTGGATGCCATTATGTACAGATTTTGTAgatcatgaaaataataatgtcagaCTGTATCGAACAGCTTTTATATAAacctgcaattaaaataattctgtgtAAATTTCTTCTATTATTTGTATCAGTACTGTTTGAATCCCAGAATGGTCTTTTTACAAATGCCAGTAGCATTGTTGGTCTTGTACGTTACATTCTTATTTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88084 True 1484 lncRNA 0.37 1 15727434 15728917

Neighbor

gene id symbol gene type direction distance location
AMCG00014494 NA coding upstream 1994 15715800 ~ 15725440 (+)
AMCG00014496 pdcl3,LOC106586481,LOC102788355 coding upstream 23975 15700154 ~ 15703459 (+)
AMCG00014487 zc3h13,LOC105022574,LOC106573267,LOC106510916 coding upstream 56286 15656929 ~ 15671148 (+)
AMCG00014489 lcp1,LOC106582249 coding upstream 72589 15630190 ~ 15654845 (+)
AMCG00014488 NA coding upstream 110269 15600159 ~ 15617165 (+)
AMCG00014495 NA coding downstream 6728 15735645 ~ 15749118 (+)
AMCG00014501 NA coding downstream 51672 15780589 ~ 15781550 (+)
AMCG00014500 LOC101071565 coding downstream 94359 15823276 ~ 15870879 (+)
AMCG00014503 NA coding downstream 145666 15874583 ~ 15877671 (+)
AMCG00014505 NA coding downstream 156346 15885263 ~ 15903047 (+)
G70418 NA non-coding upstream 202419 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 221386 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 226602 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 276166 15450778 ~ 15451268 (+)
G70378 itm2b,LOC108430053 non-coding upstream 296582 15350642 ~ 15430852 (+)
G70562 NA non-coding downstream 189496 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 508193 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 761494 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 1001961 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 1300043 17028960 ~ 17097964 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 41535 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 485101 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1370566 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1522420 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2038246 13655238 ~ 13689188 (+)
AMCG00014508 NA other downstream 400562 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 736704 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1635881 17364798 ~ 17487050 (+)
G71004 NA other downstream 2542937 18271854 ~ 18274360 (+)
G71525 NA other downstream 7126425 22855342 ~ 22855646 (+)

Expression


Co-expression Network