Gene
RNA
| Item | Value |
|---|---|
| gene id | G70562 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 15918413 ~ 15918621 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006401 | RNA catabolic process | biological_process |
| GO:0006402 | mRNA catabolic process | biological_process |
| GO:0000956 | nuclear-transcribed mRNA catabolic process | biological_process |
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88167 | True | 209 | lncRNA | 0.48 | 1 | 15918413 | 15918621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014504 | NA | coding | upstream | 1447 | 15907581 ~ 15916966 (+) |
| AMCG00014505 | NA | coding | upstream | 15366 | 15885263 ~ 15903047 (+) |
| AMCG00014503 | NA | coding | upstream | 40742 | 15874583 ~ 15877671 (+) |
| AMCG00014500 | LOC101071565 | coding | upstream | 47534 | 15823276 ~ 15870879 (+) |
| AMCG00014501 | NA | coding | upstream | 136863 | 15780589 ~ 15781550 (+) |
| AMCG00014502 | NA | coding | downstream | 28959 | 15947580 ~ 15954701 (+) |
| AMCG00014506 | fdx1 | coding | downstream | 89778 | 16008399 ~ 16036760 (+) |
| AMCG00014507 | NA | coding | downstream | 220852 | 16139473 ~ 16154656 (+) |
| AMCG00014514 | NA | coding | downstream | 246224 | 16164845 ~ 16189661 (+) |
| AMCG00014512 | mphosph8,LOC106586589 | coding | downstream | 273302 | 16191923 ~ 16208140 (+) |
| G70496 | NA | non-coding | upstream | 189496 | 15727434 ~ 15728917 (+) |
| G70418 | NA | non-coding | upstream | 393398 | 15522525 ~ 15525015 (+) |
| G70415 | NA | non-coding | upstream | 412365 | 15505814 ~ 15506048 (+) |
| G70413 | NA | non-coding | upstream | 417581 | 15500558 ~ 15500832 (+) |
| G70409 | NA | non-coding | upstream | 467145 | 15450778 ~ 15451268 (+) |
| G70637 | NA | non-coding | downstream | 318489 | 16237110 ~ 16240338 (+) |
| G70735 | NA | non-coding | downstream | 571790 | 16490411 ~ 16491118 (+) |
| G70776 | NA | non-coding | downstream | 812257 | 16730878 ~ 16733637 (+) |
| G70835 | NA | non-coding | downstream | 1110339 | 17028960 ~ 17097964 (+) |
| G70846 | NA | non-coding | downstream | 1213442 | 17132063 ~ 17173062 (+) |
| AMCG00014490 | rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 | other | upstream | 232514 | 15675631 ~ 15685899 (+) |
| AMCG00014470 | NA | other | upstream | 676080 | 15221914 ~ 15242333 (+) |
| AMCG00014461 | NA | other | upstream | 1561545 | 14302447 ~ 14356868 (+) |
| AMCG00014456 | NA | other | upstream | 1713399 | 14189564 ~ 14205014 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | upstream | 2229225 | 13655238 ~ 13689188 (+) |
| AMCG00014508 | NA | other | downstream | 210858 | 16129479 ~ 16139032 (+) |
| AMCG00014525 | NA | other | downstream | 547000 | 16465621 ~ 16469209 (+) |
| AMCG00014553 | atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 | other | downstream | 1446177 | 17364798 ~ 17487050 (+) |
| G71004 | NA | other | downstream | 2353233 | 18271854 ~ 18274360 (+) |
| G71525 | NA | other | downstream | 6936721 | 22855342 ~ 22855646 (+) |
