G70637


Basic Information

Item Value
gene id G70637
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16237110 ~ 16240338 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88264
AGGAAACATATAGCATGCAACTATTGTCACATGCGTTTCCTGaactattgtttttctttgtttctaaaCACTATTTTACAGATTATTCTCTCTGACACTGAGCCCATAGACATGCAAGAGAATTTATTTCTTATgcctaaaataaacatttacaccaCTTAGCAaatttaatctttcatttaaCTGAACAATTCAGAACTATAACAATCCCATTTGAGACCTAAGATAGATAAGTAGTTATTAGTTATGTAGATTTGGTTTAAATCTACTTAGTGGAAGGAAGCACACCTGCAGGGACCAGGTGATCAGAACCCCATCCCCACTAGGAGGAATGGAGAGACGGTGACTGAGGAGACGGAAGGGATGTGAAGCAACACACATTGGGAAGGTGTGGCAGGTAACAGGTATAGGTATTTGGATGGGCTGCAGCGAGTGTGAAGTTGGAACTGTCCActcattaactttattttaaaacattataaaaagaCATGTAAGGAGGATTAAAGCTCACAAGGCAGGGAAATTGCTTGCATGCAATCATGGCACCTGctatgttttatgaaactggACATTGCACAAGCAACAGTGGAAAAGCCAAGGGCTACAATGAATATATTCATGAATATATTCATTTTGCAAAGTAAGATCCTTATAGTTGtgataatttatacattttagttttagcatatgcaatttgtatatttttaattacattaaaagcatACATCAGATTCTGGGTAAGTGACAGTTGATTTACTGCCTATATTAATGAACATATAAAAGACAGGGccaaaacatacagaaaatcCTCACTGCATATAAAATAGGATTTAAATGAACTAATATCCATTACTGGCTAAAAGGATTAGACAGTTGATATTAATATCAGTTAAACCTAAATAGCTTAATACTAAAAAAGTTCATATTAGTATTGTATTAAAGTCATGTTGAAGAGTTAAATTAAGTGCTTTAGATAGGGACTATACATTTGATGCATGTCCTTCATTCCAGGTCTAAAGAACCTGGAATGTTTCAATAGCTTCATTAGTTCACTGGATTGCAGTTCTACACCCATGGCTTTGACTTGACTGAATCtagtaaaacactgaaataaaaaaagatgctCAAGAAATACCCCAGGACATGGAATTTGAACTCTGCATTCAAATATGGCCAGAATATTTGATGTAGTGGAAATCTAAAAATAGTATTTGTAGGTACAGGGCTTCATTGTACTGCACTTCTAAATATGTAAATTCTAAATGCTTTTTATGTATGACCTCAAATggaacaaatgtattatatatatatagatccaTTTATCTGTAATAacactcattttaaaataaaaaccagatGTTCACATAGGAACATGATTTGAGACAAAGATCTTTGTCATTATTATGGGGTCAGAAAAGGAACAAAACCATCAACTTATGAATAGAAGAAAGGACCTCCGAAAGAGGGGTTTAACACAACAGGCTAGAGCAGATCACATTTAAACCCAATTCCACAGGTTACAGATCTGCAACAAGGAGGTTACAGGTTTCCCCATTAGATTGTGCACTGTGAAGGGTATCTGAAGCACTTTCTTTTAAGTGCCCAAACCACCTCCACCCCACCTGTGGAAGAATCTCTATAGTTGGGCTCAGTTAATATTTAAGTGTCAGCATGAGGCTGGACTGAAACATAAATGGACCACTCccatattgaaatgtatgaaattgCAGGTGGCTACTACAGAACACACGGAGACCACCCAAGCCCCTCCCCCTCAGAATGTTTACATAGATCATGAATAATCCATTTACTCTAGTTCACTTTTGTCTTGATAAGAACCAGTAAAAATCACAACTTTGAGTCGTACTAAAGCAACACTTGGATTAAAGCAATGGAGTTTGATCATCAAATCCTAATTATTAGGGAATCAGACAGCTGTGTTCAAATGCTGTTGTTCAGCAGATTGATAAAGGGAAAGCTTTAAAAGCAGAGCGGATGACATGGTAAGGATGTGGGATATAACAGGTTGTCAGTGTAAACATCCAATGTGGTTACCATAGTGATACAGGGTAgttacacatataaataaatggcatgGTTTACACATAATGGGAAATACTATACTGGGTTTAACCTGAGGAATAGAGAATTATGAAACATTCATTGCAGCAAAGAAAAGTATATAGAATTAGGATACCATTCATGATTTCATCCAAGAAATTTAATATAAATCCATCCACAAAAGTTTATGGCACACAAGTATGTCAGTTTATGACAATGCTTATAGCCTAAAAACTTAAGTTCTCTTAAAATCAGGATAATTTACTGCGAGAAGAGAACCATGAAGATCATTCGAACAAAGCTTGATCAAATTTGTGAAGTCAATTCAgtcttattaaatgtgtaattgtatatgatataaataaaattatgctTCAAACTGTGCTTTTAACTGAAGACTGATTAACCACGACCTATGGGAATTTGACTTTTTGATGACGTCAATTTAACTTGACGCAGCCAGTCCAAagtttccaaatatatatatataattatttttttaaacaaaaagttCATGCCGGATTTTCATGCCTTGATGTGACTAGGCCAGAGTGAAAGGCCCTTAAGGCACTGCACTGAGTCAGTGattcaagaaaacaattgttttgctttgaacaCAAAGATTAGTGAAGTTTACATTTTAGCACTTAGGTAAccattttacagatttattcCCTGAGTTGAGACACTTAGGTTATGGCATAATTCCAAATCATATTCCTGCAGACCtgcatatattgtatatataaaaaataggtTTCTATTATTTCCACTGCAGAGTTCTCTGGGTATAAGTACATTAATctacatgcattttaatgcattattttgcagGTAGATCTtgctgaggaaaataaaaacttgccAACTCTGTCAGGTATGTGTTCTTAAATGTCAAGTGGCATTTGACAAAGCCGCACACAGATTACtacttaaatttaaattaatatttgaattagcAGTGCTCTAGACAGGTGGACACAAGAACTGGTTTTACCACAGAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88264 True 3068 lncRNA 0.35 2 16237110 16240338

Neighbor

gene id symbol gene type direction distance location
AMCG00014512 mphosph8,LOC106586589 coding upstream 28970 16191923 ~ 16208140 (+)
AMCG00014514 NA coding upstream 47449 16164845 ~ 16189661 (+)
AMCG00014507 NA coding upstream 82454 16139473 ~ 16154656 (+)
AMCG00014506 fdx1 coding upstream 200350 16008399 ~ 16036760 (+)
AMCG00014502 NA coding upstream 282409 15947580 ~ 15954701 (+)
AMCG00014513 NA coding downstream 17903 16258241 ~ 16278438 (+)
AMCG00014516 ift88 coding downstream 105696 16346034 ~ 16370627 (+)
AMCG00014517 NA coding downstream 131415 16371753 ~ 16373757 (+)
AMCG00014524 sap18,LOC107597378,LOC107668906,LOC107569214 coding downstream 196839 16437177 ~ 16438737 (+)
AMCG00014522 NA coding downstream 208325 16448663 ~ 16450651 (+)
G70562 NA non-coding upstream 318489 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 508193 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 712095 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 731062 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 736278 15500558 ~ 15500832 (+)
G70735 NA non-coding downstream 250073 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 490540 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 788622 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 891725 17132063 ~ 17173062 (+)
G70865 NA non-coding downstream 1009981 17250319 ~ 17253671 (+)
AMCG00014508 NA other upstream 98078 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 551211 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 994777 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1880242 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 2032096 14189564 ~ 14205014 (+)
AMCG00014525 NA other downstream 225283 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1124460 17364798 ~ 17487050 (+)
G71004 NA other downstream 2031516 18271854 ~ 18274360 (+)
G71525 NA other downstream 6615004 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 10664539 26904877 ~ 26911237 (+)

Expression


Co-expression Network