G70731


Basic Information

Item Value
gene id G70731
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16465779 ~ 16469228 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88386
tccttcaGCATCTACAAATCAGCATATTGTGTTATTCCAGTTAAAACAACTTTGACAAACAGTACAGAGGCCACTAAATTCTGAGTCTGACTGACACCACAAACAAGAAAGGATTGGAAACCAAAAtgttcaggatttttttttattaaattatagactattttctcattattttagGAAATACCACAGTTTTGGAgagaataaacatttacatacactTTGGAGTCGATAGAAATGAGCATCACAAATATTccattgcaattaaataaataaagctcagAGGATCACCACAGCATTTCAGTCACCAGACACCAGGAACAcaCACAAATGCTCAGTCCCACTACGTTTTGTTAAGATGTGGTTAGATTTTAAATCCCAGGGCCCTCATACACTCCTTGTGAGCCTCGATCAGATCTCTGCAGCCCTCTTCGCCCTTCTCAATACAGGCATCTCTGACTTTCTTGGTCTCCGGACACGCACAGCACGCCTTCAGGGGCTTCGTGTCCTGCGGCTCCTGGGCGCACTGGCCGCTGCTGGCCTCGCAGCTCGCTGCTGGTAAACTGGCCATTTTCCGGTTGGGTTGTCTGTCCTTGAGACACggaaataaatgcaatgaaCGAATTCATTAATCAGACCGCGAACCAGTGATCactttcaatgaaaataaactgaacaaatcGAGAGCAGATCGGACATTCACAACAGCACACACTTCACTGCCATGCCGGTTTGGTTTCAAATACTAAGGCAGCggttttaaaactgttttaatgagAAACAGATCTCATCTGGGTTTCATAACCACATGCTACGCAATCGCGAAAATAATTCTCATCTCCTGACAGATTTCCATAGCGCATGAAGCCAAAGcagaaataatataatgtattgaaaaataatacaattcttaaTTTCAATGCGAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU88386 True 923 lncRNA 0.41 3 16465779 16469228

Neighbor

gene id symbol gene type direction distance location
AMCG00014529 NA coding downstream 8411 16451881 ~ 16457368 (-)
AMCG00014526 NA coding downstream 18811 16439295 ~ 16446968 (-)
AMCG00014530 NA coding downstream 34122 16425395 ~ 16431657 (-)
AMCG00014527 LOC104951642 coding downstream 45288 16411736 ~ 16420491 (-)
AMCG00014528 xpo4,LOC106582068 coding downstream 56491 16380894 ~ 16409288 (-)
AMCG00014533 NA coding upstream 10659 16479887 ~ 16496581 (-)
AMCG00014532 NA coding upstream 28059 16497287 ~ 16504076 (-)
AMCG00014534 hao2,LOC102793069 coding upstream 38159 16507387 ~ 16512051 (-)
AMCG00014540 fam46c,LOC107658236,LOC107597368,LOC107724489,LOC107668849,LOC107569365 coding upstream 313849 16783077 ~ 16785522 (-)
AMCG00014541 man1a2,LOC107668846,LOC107658234,LOC107724469,LOC107597367,LOC106582087 coding upstream 330813 16800041 ~ 16814919 (-)
G70689 NA non-coding downstream 96315 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 183880 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 251652 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 762465 15700208 ~ 15703314 (-)
G70458 NA non-coding downstream 820865 15643619 ~ 15644914 (-)
G70876 NA non-coding upstream 815091 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 880208 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 1534582 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1859969 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 2195036 18664264 ~ 18664631 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3332028 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 4798242 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5328693 11125029 ~ 11137086 (-)
G69537 NA other downstream 5667632 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 6404549 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 252845 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 977640 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 1120039 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 1521423 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2732575 19201803 ~ 19203567 (-)

Expression


Co-expression Network