G70835


Basic Information

Item Value
gene id G70835
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17028960 ~ 17097964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88522
taaacaattaacatttattcAAGCTGTCACAACTGCAAGAGATGGACAGATTAAAACCATGACTCAATGCTAGGAGCATGCTCAGTAGCAGAATTCAAAAACACAGCGGTGGTAAAGAAACACATTGCTATCACACTGCAGCATGACAGCAAGGGAGTGAAAACCCTGAACAGAAGGCTTTGCATGTTAGGATATTTCCCACATGTTCAAATGTTGCACTGCAGCACACTGAGTGCCAAATACATCTGAAATATCAACTTAATTTTATTCACAGTTAAGgaatgtttgtgtatgtgcattACATACTGTATAAGATTTATGGGGTAGGAGAGCTGTTACACCACCTAGCTATACAGTATAGCCAGAGAATCATTTAGATTTGTGCCTTCAtgcataaaaaaagataaaatcagGATTATGTGAATAAAATGTCAACCTGACTAAGAAGCTTTCTTGTACTATTTCAGAATGTAAATAACTGAAGAAGTAGGTAATTATTTACCAGCTCATTATGGAATAACTGtgtcatgaaaaaaaacaaaaaacatattgaacatatttgtattgcaatagATGGGAAAATACTCAAAGTgccttattttttctttcaaagtttCCATTTGAAAGCGCTTGCTACagttcagtaaaaacaaaaaagcaaaaacaaaagatccaaaacaacagcaaaaaccTAGCAATGTACCTTCCTCTTAACTCAGTGCACTATttttgtgaagttttttttttttttttttttttttttttttaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88522 True 770 lncRNA 0.33 2 17028960 17097964

Neighbor

gene id symbol gene type direction distance location
AMCG00014536 gdap2,LOC104943794,LOC104954255 coding upstream 263408 16737483 ~ 16765552 (+)
AMCG00014538 NA coding upstream 297091 16722198 ~ 16731869 (+)
AMCG00014537 NA coding upstream 309223 16692012 ~ 16719737 (+)
AMCG00014535 tbx15,LOC107712261,LOC107724509 coding upstream 417299 16583824 ~ 16611661 (+)
AMCG00014531 wars2,LOC106531917 coding upstream 450803 16557564 ~ 16578157 (+)
AMCG00014552 NA coding downstream 230949 17328913 ~ 17332815 (+)
AMCG00014560 NA coding downstream 681601 17779565 ~ 17780081 (+)
AMCG00014565 NA coding downstream 851596 17949560 ~ 18029896 (+)
AMCG00014564 NA coding downstream 940144 18038108 ~ 18067182 (+)
AMCG00014563 klf5,LOC107757638,LOC102777034 coding downstream 972570 18070534 ~ 18080340 (+)
G70776 NA non-coding upstream 295323 16730878 ~ 16733637 (+)
G70735 NA non-coding upstream 537842 16490411 ~ 16491118 (+)
G70637 NA non-coding upstream 788622 16237110 ~ 16240338 (+)
G70562 NA non-coding upstream 1110339 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 1300043 15727434 ~ 15728917 (+)
G70846 NA non-coding downstream 34099 17132063 ~ 17173062 (+)
G70865 NA non-coding downstream 152355 17250319 ~ 17253671 (+)
G70883 NA non-coding downstream 218289 17316253 ~ 17317556 (+)
G70897 NA non-coding downstream 251472 17349436 ~ 17350952 (+)
G70908 NA non-coding downstream 391862 17489826 ~ 17490607 (+)
AMCG00014525 NA other upstream 559751 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 889928 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 1343061 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 1786627 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 2672092 14302447 ~ 14356868 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 266834 17364798 ~ 17487050 (+)
G71004 NA other downstream 1173890 18271854 ~ 18274360 (+)
G71525 NA other downstream 5757378 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 9806913 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 10737539 27835503 ~ 27841871 (+)

Expression


Co-expression Network