G70897


Basic Information

Item Value
gene id G70897
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17349436 ~ 17350952 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88591
GGAGAGACCCAAATGCAAAAGTGGGAGACACACCAGAAGaccaaaatgcaaaatgtgaaaCACACCAGAAGACCTAAATGCAAAAAGGGGAGACACACCAGATGACTCAAATGCAAAAGGGAGAGCCACAGCGGGAGACCCAAATTCAATAACAGAACACTCTTCAAAAAATGAATGTAGAAGATTATTCTAATATTAATCTAGGTGGGTTATCTTTCCTGTagcgttttcttttttgttgtataAAACGATGTTTcacaccttttttgtttaaataatattttgagaaGTGTCTGCAGTGGGGTTACCATGACAATGGAGCACTCCCAATAGTCCTGAATGAAGGGGTTTCCCGagtgttgttttcttgtatttttttcattgttccTTAAATCACTTGCTAAAAAATTGAAAGGCTGTCCAATATTAATTATCCATGTTGAAGAGAGGATCTACGATGGCTATGACTACACTTGTTTGCTTCTGCttaaatattcaatttgaaatgtggAATTCATACATCTAATCAGTCTAATGGGACAAACCTGCTGCAAAGACAATAGTTATATTAATCAAAGTGCTTGATTCATATCTCAATACTGAATGTGAATTTCAGGAAACTCTAATTCTCTTAGAGAATGGAAAACCATGTTATGcccatttccattttcaatgGGGTAGAAATTAATCACCTTACATAATACATAGTAaacataaatatactgtatgttgTGGCACTGTGTGGAGTTGGACACAATGCCAAGGCTAAATGTAGAGGCAGGGTCTATGAAGTAGGAACACACAGGCCAGGATATGGTGAAAGGAGGTGGTATATTTTACACTGAGGAggtgataaaaacaaaaggacataCAAAAAACTATAAACTAAACCCTAGCTCCTTTTTGAGCCTacataaatacttaaaacagGTACCTCTCAAAAAAATGTACCTAATTtaacacaaccaaaacaaaacagcaaccaaGCCAATGTCCATAATCCAAGAATCCAATACAAATTTCAAGTAATATGTTTGTTACCAGTAGATTTCACTGTCTCTTCACTGtcttttctccttctttcccAAGAACAAAAGGTGACAGCTTCTTGATTATTCAGCTCTGGAAAAGATTAAGAGACCACTGGAATTTTTTGTATGGCAgctattccattccattcaaatttttatttggaatttgggagaaatgttttcagtagtttatagaataaaacaaaatgttaatttcacccaaacacatacctataaatagtaaaaccagagaaactgataatttatcaatggtctcttaattttttccagagctgtatatgcagCAGCCGGCCATTGGAGGGAGTCCTGCACATCATGTGCTTACCCCAGAGTGAGCCATAGGCTTCTGGGGGATGTAGTGCCATTCAGGGCAGCCTTTACCTGCCCTGCCCAGTGCTGCATCACAATGTATAGGTAGCAAAGCTTGTTCAATTCATTGATATGTAGAATTTCActgatatgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88591 True 1517 lncRNA 0.37 1 17349436 17350952

Neighbor

gene id symbol gene type direction distance location
AMCG00014552 NA coding upstream 16621 17328913 ~ 17332815 (+)
AMCG00014536 gdap2,LOC104943794,LOC104954255 coding upstream 583884 16737483 ~ 16765552 (+)
AMCG00014538 NA coding upstream 617567 16722198 ~ 16731869 (+)
AMCG00014537 NA coding upstream 629699 16692012 ~ 16719737 (+)
AMCG00014535 tbx15,LOC107712261,LOC107724509 coding upstream 737775 16583824 ~ 16611661 (+)
AMCG00014560 NA coding downstream 428613 17779565 ~ 17780081 (+)
AMCG00014565 NA coding downstream 598608 17949560 ~ 18029896 (+)
AMCG00014564 NA coding downstream 687156 18038108 ~ 18067182 (+)
AMCG00014563 klf5,LOC107757638,LOC102777034 coding downstream 719582 18070534 ~ 18080340 (+)
AMCG00014569 NA coding downstream 973318 18324270 ~ 18332414 (+)
G70883 NA non-coding upstream 31880 17316253 ~ 17317556 (+)
G70865 NA non-coding upstream 95765 17250319 ~ 17253671 (+)
G70846 NA non-coding upstream 176374 17132063 ~ 17173062 (+)
G70835 NA non-coding upstream 251472 17028960 ~ 17097964 (+)
G70776 NA non-coding upstream 615799 16730878 ~ 16733637 (+)
G70908 NA non-coding downstream 138874 17489826 ~ 17490607 (+)
G70938 LOC107575789,LOC100846954 non-coding downstream 299819 17650771 ~ 17651002 (+)
G71036 kctd12 non-coding downstream 1114267 18465219 ~ 18468335 (+)
G71038 NA non-coding downstream 1126091 18477043 ~ 18478028 (+)
G71136 NA non-coding downstream 1337596 18688548 ~ 18692633 (+)
AMCG00014525 NA other upstream 880227 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 1210404 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 1663537 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 2107103 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 2992568 14302447 ~ 14356868 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 13846 17364798 ~ 17487050 (+)
G71004 NA other downstream 920902 18271854 ~ 18274360 (+)
G71525 NA other downstream 5504390 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 9553925 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 10484551 27835503 ~ 27841871 (+)

Expression


Co-expression Network