G70898


Basic Information

Item Value
gene id G70898
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17349436 ~ 17350972 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88592
TCTGTTTtcaaccattttattttcatatcagTGAAATTCTACATATCAATGAATTGAACAAGCTTTGCTACCTATACATTGTGATGCAGCACTGGGCAGGGCAGGTAAAGGCTGCCCTGAATGGCACTACATCCCCCAGAAGCCTATGGCTCACTCTGGGGTAAGCACATGATGTGCAGGACTCCCTCCAATGGCCGGCTGctgcatatacagctctggaaaaaattaagagaccattgataaattatcagtttctctggttttactatttataggtatgtgtttgggtgaaattaacattttgttttattctataaactactgaaaacatttctcccaaattccaaataaaaatttgaatggaatggaatagcTGCCATACAAAAAATTCCAGTGGTCTCTTAATCTTTTCCAGAGCTGAATAATCAAGAAGCTGTCACCTTTTGTTCTTgggaaagaaggagaaaagaCAGTGAAGAGACAGTGAAATCTACTGGTAACAAACATATTACTTGAAATTTGTATTGGATTCTTGGATTATGGACATTGGCttggttgctgttttgttttggttgtgttaAATTAGGTACATTTTTTTGAGAGGTACctgttttaagtatttatgtAGGCTCAAAAAGGAGCTAGGGTTTAGTTTATAGTTTTTTGtatgtccttttgtttttatcaccTCCTCAGTGTAAAATATACCACCTCCTTTCACCATATCCTGGCCTGTGTGTTCCTACTTCATAGACCCTGCCTCTACATTTAGCCTTGGCATTGTGTCCAACTCCACACAGTGCCAcaacatacagtatatttatgttTACTATGTATTATGTAAGGTGATTAATTTCTACCCcattgaaaatggaaatgggCATAACATGGTTTTCCATTCTCTAAGAGAATTAGAGTTTCCTGAAATTCACATTCAGTATTGAGATATGAATCAAGCACTTTGATTAATATAACTATTGTCTTTGCAGCAGGTTTGTCCCATTAGACTGATTAGATGTATGAATTccacatttcaaattgaatatttaaGCAGAAGCAAACAAGTGTAGTCATAGCCATCGTAGATCCTCTCTTCAACATGGATAATTAATATTGGACAGCCTTTCAATTTTTTAGCAAGTGATTTAAggaacaatgaaaaaaatacaagaaaacaacactCGGGAAACCCCTTCATTCAGGACTATTGGGAGTGCTCCATTGTCATGGTAACCCCACTGCAGACACttctcaaaatattatttaaacaaaaaaggtgtgAAACATCGTTTtatacaacaaaaaagaaaacgctACAGGAAAGATAACCCACCTAGATTAATATTAGAATAATCTTCTACATTCATTTTTTGAAGAGTGTTCTGTTATTGAATTTGGGTCTCCCGCTGTGGCTCTCCCTTTTGCATTTGAGTCATCTGGTGTGTCTCCCCTTTTTGCATTTAGGTCTTCTGGTGTGtttcacattttgcattttggtCTTCTGGTGTGTCTCCCACTTTTGCATTTGGGTCTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88592 True 1537 lncRNA 0.37 1 17349436 17350972

Neighbor

gene id symbol gene type direction distance location
AMCG00014551 NA coding downstream 25815 17314186 ~ 17323621 (-)
AMCG00014549 NA coding downstream 69989 17250290 ~ 17279447 (-)
AMCG00014550 NA coding downstream 108362 17170830 ~ 17241074 (-)
AMCG00014548 LOC105904639 coding downstream 222660 17120204 ~ 17126776 (-)
AMCG00014547 NA coding downstream 262650 17065669 ~ 17086786 (-)
AMCG00014554 LOC108242195,LOC106919873,LOC106525269,LOC106574724 coding upstream 67485 17418457 ~ 17432186 (-)
AMCG00014556 LOC107569141 coding upstream 133878 17484850 ~ 17500956 (-)
AMCG00014557 NA coding upstream 204695 17555667 ~ 17566646 (-)
AMCG00014558 NA coding upstream 221931 17572903 ~ 17582074 (-)
AMCG00014561 dach1,LOC107668899,LOC108426032 coding upstream 403992 17754964 ~ 17808430 (-)
G70876 NA non-coding downstream 64860 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 880208 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 979972 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 1067537 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 1135309 16212544 ~ 16214127 (-)
G70954 NA non-coding upstream 652838 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 978225 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1313292 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 1317829 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 1335526 18686498 ~ 18687346 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 611559 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 4215685 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5681899 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 6212350 11125029 ~ 11137086 (-)
G69537 NA other downstream 6551289 10796716 ~ 10798147 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 95896 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 238295 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 639679 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 1850831 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 1866750 19217722 ~ 19225230 (-)

Expression


Co-expression Network