G71004


Basic Information

Item Value
gene id G71004
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18271854 ~ 18274360 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88725
CTGGCTTCAGCAGAGAGCAGGGGTCCCGTAATAGAAAGCTTACCCAGGTCAACGAGGATGGCATGTTGCTGGGTAGTGAGCTGCTTCAGGAGCTCTTTGTAGGAGAGGTCCGGTGGCTGCTGCTTGCAGGGCAGCCGGTGACGCAGGCGATACTGGTGCGACAGAAACTGCCAGATCTCACCACGTCGAGTCTTTGGTACACCTTCATACAAAAACGAGAAAGGCATGCCATACTCTTAGTCTGGCAGGGTTGTTACAAGAAGATTAAGGTGCAAGATCGGTTTCACTACACATGCACACTGTTAGTGCACATTTCAAGCTCACGGCTGGAATATCAGTCATCTCACTGGATTACAAGTTCCATCATTGGGTTTAGTATATATCCGGCCAGAATATACCATGCTTGACTTTTGCAAGGGAGATGAATGGAATCACACACAAGTatgattggtttatttaattttctgcttctgtttgCCATGCatttgtacaatgtgtgtgtctgccacCGTGGAGAGAGGCGCAGTGACAAGTGCAGCTCTCACCCTGGCTGAGGGCGCTGTGGATCTCCTCCATGTCACACTTGGTCTTGGCTCGGACCGGGACGCTCAGCCTCTTGTCCCACGCAGCCAGAACATCCTTCGGACACTGGCCCACCTCCTGGTAATCAAGCTTGATCTTCCGAGTATGCAGTTCATCTCTGCTGGCTCCCTCCAGACGCTGGTTCTCCTTCTCCATGCGCAGTAGCAGTATCTGCTGGTGGATGGCCTTCTTCCACAGCACTCTGAGCTCTTCTGGAGTGCGCTTGGGTCTCTCCCCAGCAGGCAGCTCCTCGGGCTGTAGTAGGGTGGCCAGGGGGTCTTCTTCCACAGCAGGGGCCAGTGGGGACAGCGGCAGCAGGTCGTTCCCATCCAGACGGTCTGCAAACACAGAGAAACGCTGCTGTTAACTGTGCACATCGGCAGTGGTCTCTCAGGCAAAACAACACTTAAACCAGGACTACTTGAGAAGTGCCCTTCATACCATGGCTATATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88725 True 1037 TUCP 0.53 2 18271854 18274360

Neighbor

gene id symbol gene type direction distance location
AMCG00014563 klf5,LOC107757638,LOC102777034 coding upstream 191514 18070534 ~ 18080340 (+)
AMCG00014564 NA coding upstream 204672 18038108 ~ 18067182 (+)
AMCG00014565 NA coding upstream 241958 17949560 ~ 18029896 (+)
AMCG00014560 NA coding upstream 491773 17779565 ~ 17780081 (+)
AMCG00014552 NA coding upstream 939039 17328913 ~ 17332815 (+)
AMCG00014569 NA coding downstream 49910 18324270 ~ 18332414 (+)
AMCG00014574 NA coding downstream 100284 18374644 ~ 18395600 (+)
AMCG00014573 NA coding downstream 196191 18470551 ~ 18475184 (+)
AMCG00014575 NA coding downstream 204049 18478409 ~ 18480032 (+)
AMCG00014583 NA coding downstream 312074 18586434 ~ 18609444 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 620852 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 781247 17489826 ~ 17490607 (+)
G70897 NA non-coding upstream 920902 17349436 ~ 17350952 (+)
G70883 NA non-coding upstream 954298 17316253 ~ 17317556 (+)
G70865 NA non-coding upstream 1018183 17250319 ~ 17253671 (+)
G71036 kctd12 non-coding downstream 190859 18465219 ~ 18468335 (+)
G71038 NA non-coding downstream 202683 18477043 ~ 18478028 (+)
G71136 NA non-coding downstream 414188 18688548 ~ 18692633 (+)
G71183 NA non-coding downstream 626865 18901225 ~ 18902161 (+)
G71237 NA non-coding downstream 773598 19047958 ~ 19048172 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 784804 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 1802645 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2132822 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 2585955 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 3029521 15221914 ~ 15242333 (+)
G71525 NA other downstream 4580982 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8630517 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 9561143 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 9594343 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 10028013 28302373 ~ 28304073 (+)

Expression


Co-expression Network