G71016


Basic Information

Item Value
gene id G71016
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18329197 ~ 18331100 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88747
TACAATGAGCACTGTTCAGTTTAATATAGGTACCTCAGGAGTAAACTTAAACCCAAGTCACCTTCATCTTAACTGGAAACACAGTCAAgaacacaaatcaaaataaactagtACCagcatattgaaaaaaaaaacttgcatgcTTTCCAAACCCCCGAGGgagattcaaaatgtatattttttaataaaagcatttctgaTTAAACGTGATTGAAGTCAGACCCTATTACTTAGCTTATAGAAATCCAGTCTTTTGTAAAACAtgatacaaacaaatatataaatcacaaaacacacataactgaatcttattttatttctgtcagcAATAACCTCTCAAATTGTTTGGTACTTGTTTAAGCACTGCTTTTAATTGCTAGAAGTGAAACATCCTTTTTGTTGTCAGTGCTGGAGCAGTTCAAATACAGATTAAACTTACCACAGTAATACTGAGCAGCCGTTAGCCAAATAAAACCACAGGATATGTTCAATATttgttaatacagtacaatatatctATATCATTCTTTAATTATGTCTCAGATGTCTCACTAAATTAGATATGGCCAATTCAGGCAGAACCATAGGTGTTATCattcccattttgtttttggtaagGTGGCTACAAACATCATGGTTGAGTCACAAGctttaatagtttttaatttcagtctcCACTACACAATGTAGAAATGTTAATGTCTTAAAACTTGCAGCACTTATGAATGGTTGGCAGTATTTCTTAAGAGTTTATCAAAAGCATAATTGGTGGTAGCGTGCCTTATACTTTGGAAAGAGCCACCACGGTAAACCTCAGCTCCTCAGGATCGCGTGCCATGAACTTCTTACACACCTCTGTAGCatctCTAGAAAAGTATCTTCTGCAGTTTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88747 True 894 lncRNA 0.35 2 18329197 18331100

Neighbor

gene id symbol gene type direction distance location
AMCG00014570 NA coding downstream 5498 18318085 ~ 18323699 (-)
AMCG00014572 LOC107655530,LOC107720111,LOC107668890 coding downstream 11933 18316854 ~ 18317264 (-)
AMCG00014571 NA coding downstream 37692 18263955 ~ 18291505 (-)
AMCG00014568 LOC104962236,LOC106536821 coding downstream 149911 18115011 ~ 18179286 (-)
AMCG00014566 NA coding downstream 291628 18029841 ~ 18037569 (-)
AMCG00014578 kctd12 coding upstream 136310 18467410 ~ 18468282 (-)
AMCG00014577 zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427 coding upstream 144443 18475543 ~ 18477922 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding upstream 154161 18485261 ~ 18487280 (-)
AMCG00014579 mycbp2 coding upstream 158450 18489550 ~ 18557288 (-)
AMCG00014585 NA coding upstream 308712 18639812 ~ 18644670 (-)
G70954 NA non-coding downstream 325174 18003810 ~ 18004023 (-)
G70898 NA non-coding downstream 978225 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 1044621 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 1859969 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 1959733 16366124 ~ 16369464 (-)
G71133 NA non-coding upstream 333164 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 337701 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 355398 18686498 ~ 18687346 (-)
G71174 NA non-coding upstream 519624 18850724 ~ 18851111 (-)
G71179 NA non-coding upstream 543505 18874605 ~ 18878253 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 307102 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 708046 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 866907 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1591320 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5195446 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 870703 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 886622 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3894824 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8954320 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 9004595 27335695 ~ 27369527 (-)

Expression


Co-expression Network