G71160


Basic Information

Item Value
gene id G71160
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18686498 ~ 18687346 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88981
GTGGAGGCAGCCATAGAACATGTTTAAAACTAACAGTCTATAGTCTGAGCTTCTAGGTAACTTAAACAAAatcctgtctattttaaaatgtaaaagaaaatgtgttagaTTTTGCAGGTATCATTTTTACATCCATAACAAATACGGTCATtagctgctgtttttattattattattatttttatttttatttcttggcagatgacCTTATCCAGAGGGTCTGAAGTGAAATCATAACTAAAAAAGATGCTGTTAGAGAAGTATGAAAgatgtgaagaaaaatatactTGATTCTTCAGCtcatatcattttatttctaaatgaaagCATTTTCAGCATGGTTCAAGTATAGGAATGTCAGTTCATATTTCGAGTTGTTTAACATGTGATTGTAATAGTTTAAGTGAAGGCATGGTTTGTGAATGGGTTTGTTGGTGGTTTATATCATAATCTGACATAATCTGTGTTTTGTGGATCCTAGTTTCCCCTTCTGCCCAGCTTTCACTGCAGTGATTCAGGGCATGACATCTCTATTGCATCACCTGCACTAAAGCACAAAATCAGTCAGTATTGACAGCTCGTAATTAAGAGACCAGTGCCACAGGGCAAAGCTACCCCTGGGTCAGAACAAAGTGGTTTTATCGCTGAACTTCATCTCACGTGTATCTGACACAGGCCTGTCCTTGAGTCAAGAAATGGCTTTGCAATTTAATATTGGATCAATAGGTAACAATACTGGAGTTTGTGCCTCCAATtattgtatgcatgtgtgtgtggaaataattattctaacTGAATTGCTATAATATCTGTGTCACCCCTAATTCTCACTTTTTAACGCGTCTTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88981 True 849 lncRNA 0.36 1 18686498 18687346

Neighbor

gene id symbol gene type direction distance location
AMCG00014585 NA coding downstream 41828 18639812 ~ 18644670 (-)
AMCG00014579 mycbp2 coding downstream 129210 18489550 ~ 18557288 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding downstream 199218 18485261 ~ 18487280 (-)
AMCG00014577 zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427 coding downstream 208576 18475543 ~ 18477922 (-)
AMCG00014578 kctd12 coding downstream 218216 18467410 ~ 18468282 (-)
AMCG00014588 vwa8 coding upstream 8729 18696075 ~ 18709409 (-)
AMCG00014589 vwa8,LOC107579031 coding upstream 33459 18720805 ~ 18766660 (-)
AMCG00014590 vwa8 coding upstream 89430 18776776 ~ 18777608 (-)
AMCG00014593 NA coding upstream 244791 18932137 ~ 18946921 (-)
AMCG00014597 NA coding upstream 284090 18971436 ~ 18999017 (-)
G71157 NA non-coding downstream 16843 18668801 ~ 18669655 (-)
G71133 NA non-coding downstream 21867 18664264 ~ 18664631 (-)
G71016 NA non-coding downstream 355398 18329197 ~ 18331100 (-)
G70954 NA non-coding downstream 682475 18003810 ~ 18004023 (-)
G70898 NA non-coding downstream 1335526 17349436 ~ 17350972 (-)
G71174 NA non-coding upstream 163378 18850724 ~ 18851111 (-)
G71179 NA non-coding upstream 187259 18874605 ~ 18878253 (-)
G71284 NA non-coding upstream 504039 19191385 ~ 19191632 (-)
G71290 NA non-coding upstream 525298 19212644 ~ 19214404 (-)
G71291 NA non-coding upstream 527268 19214614 ~ 19215246 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 664403 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 1065347 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1224208 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1948621 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5552747 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 514457 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 530376 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3538578 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8598074 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 8648349 27335695 ~ 27369527 (-)

Expression


Co-expression Network