G71183


Basic Information

Item Value
gene id G71183
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18901225 ~ 18902161 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89012
atgtacaaaatcagcaggggatcaaatacttttttccctcactgtatagcctttttatttattaattttcagtGTCTCAATACCGTCGTACATAACCTTGTGAAACTGCTGTAAAGCTTGATGGTATCCTTCTACatatctgtatttatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatttctaaatgttaattgaagtgcaaacaaataataaatctcTAAGGGGGAATAAGCAAAATCTGAATTTGATTTCAAAGTATTTAAGTCAGAAATTACCCAGGCTGCTGACTGCAGTCAAGTAGGTAATCAATGCAAGATGTAGTCCCCAGCGATGGCACTCTGTGAACAGgcacattgtgtaatttgtccTGAGTGTGTAGGTTGGGGTCTTGAGTGCTGAATCTTAAGCAGTTGCTGGTCTTTGCCTTGGAGACAGTCTTGGGGTCCTCAGCCCTCGCCTGTTAGGCCCCACCTGTCTGCAAGAAGATTAATGTACTGAGACAACATATAAATTGTGCATACTATACAATACCCGAGTTGTATAATGAATTTTGTAATATAGGAGTAATGCTTTATTAACTGAACAGcagcaaacaatacaatatttatgaGACATCATTCTCAATGTGTCTGCATACTGGAGTTTCTTCTTTTGGGATTAAAGTCAGGCTGCAGATATGAGTACTGTTGTTGATTGTTCCATAAAACACAGGCAAGCAAATTATTTCAGAGGAATTGTTGTGGGGAGACTTTAAGATTTGTATATTGTTGTACAGAAATTATGTACCTGACCAAAGCTGAAAATGATTTACGTTAATTTGGagagtttttaatttatgttacgATTGCTCAAACCtatgtctgtttttattgttatttatatcgcttaaaataataataaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89012 True 917 lncRNA 0.35 2 18901225 18902161

Neighbor

gene id symbol gene type direction distance location
AMCG00014594 NA coding upstream 1025 18889772 ~ 18900200 (+)
AMCG00014596 akap11 coding upstream 22952 18853308 ~ 18878273 (+)
AMCG00014591 dgkh coding upstream 55254 18803406 ~ 18845971 (+)
AMCG00014592 NA coding upstream 114698 18782057 ~ 18786527 (+)
AMCG00014587 NA coding upstream 226893 18668806 ~ 18674332 (+)
AMCG00014595 dnajc15 coding downstream 47152 18949313 ~ 18963043 (+)
AMCG00014598 NA coding downstream 143522 19045683 ~ 19047641 (+)
AMCG00014599 NA coding downstream 146132 19048293 ~ 19056463 (+)
AMCG00014607 NA coding downstream 282118 19184279 ~ 19190953 (+)
AMCG00014613 NA coding downstream 291258 19193419 ~ 19196839 (+)
G71136 NA non-coding upstream 208592 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 423197 18477043 ~ 18478028 (+)
G71036 kctd12 non-coding upstream 432890 18465219 ~ 18468335 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 1250223 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 1410618 17489826 ~ 17490607 (+)
G71237 NA non-coding downstream 145797 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 316156 19218317 ~ 19222919 (+)
G71362 NA non-coding downstream 1022741 19924902 ~ 19925198 (+)
G71378 NA non-coding downstream 1284453 20186614 ~ 20186966 (+)
G71414 NA non-coding downstream 2022407 20924568 ~ 20924837 (+)
G71004 NA other upstream 626865 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1414175 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2432016 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2762193 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 3215326 15675631 ~ 15685899 (+)
G71525 NA other downstream 3953181 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8002716 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 8933342 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 8966542 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9400212 28302373 ~ 28304073 (+)

Expression


Co-expression Network