G71379


Basic Information

Item Value
gene id G71379
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 20186629 ~ 20186968 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89264
ttgcatgttaatgagggaaataagtatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacatttggcaactcgaaccttcagctccctccacagattttctatgggattaaggtctggagactggctaggccactccaggaccttaatgtgcttcttcttgagccactcctttgttgccttggctgtgtgttttgggtcattgtcatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89264 True 340 lncRNA 0.47 1 20186629 20186968

Neighbor

gene id symbol gene type direction distance location
AMCG00014616 NA coding downstream 795777 19386615 ~ 19390852 (-)
AMCG00014614 NA coding downstream 840959 19342131 ~ 19345670 (-)
AMCG00014615 NA coding downstream 847969 19330888 ~ 19338660 (-)
AMCG00014600 NA coding downstream 1002436 19174682 ~ 19184193 (-)
AMCG00014602 tsc22d1,LOC107713726,LOC107551985,LOC107748883,LOC107576221 coding downstream 1023842 19159929 ~ 19162787 (-)
AMCG00014623 LOC108428456 coding upstream 172178 20359146 ~ 20401033 (-)
AMCG00014621 NA coding upstream 265216 20452184 ~ 20458681 (-)
AMCG00014620 diaph3,LOC102302025,LOC102782473 coding upstream 289381 20476349 ~ 20479063 (-)
AMCG00014622 LOC106574996 coding upstream 514856 20701824 ~ 20708613 (-)
AMCG00014625 NA coding upstream 1109046 21296014 ~ 21312988 (-)
G71371 NA non-coding downstream 108620 20073025 ~ 20078009 (-)
G71360 NA non-coding downstream 306398 19792799 ~ 19880231 (-)
G71315 NA non-coding downstream 930695 19252574 ~ 19255934 (-)
G71292 NA non-coding downstream 969592 19216213 ~ 19217037 (-)
G71291 NA non-coding downstream 971383 19214614 ~ 19215246 (-)
G71451 NA non-coding upstream 1810954 21997922 ~ 21998188 (-)
G71461 NA non-coding upstream 2034102 22221070 ~ 22221467 (-)
G71496 LOC100846954 non-coding upstream 2119666 22306634 ~ 22306947 (-)
G71512 NA non-coding upstream 2370415 22557383 ~ 22557663 (-)
G71526 NA non-coding upstream 2668381 22855349 ~ 22855619 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 961399 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 983062 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 2164534 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 2565478 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 2724339 17446868 ~ 17462290 (-)
AMCG00014630 LOC107672672 other upstream 2038956 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 7098452 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 7148727 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 8142771 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 9202322 29389290 ~ 29398305 (-)

Expression


Co-expression Network