G71518


Basic Information

Item Value
gene id G71518
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 22655358 ~ 22655614 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89423
ggcccacaactgaatattatctaagtccctttgaatagcctgtgctgctgagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgctaactatcccagagtccagatcattaatatagattagaagaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagcaactcctctaatcgacaccctctgtttcctatacatcaaccagttca

Function

NR:

description
ubiquitin-conjugating enzyme E2 D2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89423 True 257 lncRNA 0.42 1 22655358 22655614

Neighbor

gene id symbol gene type direction distance location
AMCG00014632 nfip2,LOC107750051 coding upstream 391358 22247781 ~ 22264000 (+)
AMCG00014624 NA coding upstream 1988178 20646339 ~ 20667180 (+)
AMCG00014619 NA coding upstream 2582288 20024521 ~ 20073070 (+)
AMCG00014618 NA coding upstream 2633664 19959589 ~ 20021694 (+)
AMCG00014617 NA coding upstream 2811316 19843152 ~ 19844042 (+)
AMCG00014635 NA coding downstream 1727153 24382767 ~ 24385815 (+)
AMCG00014636 LOC108414264,LOC103139365,LOC102217784,LOC103461949 coding downstream 2036672 24692286 ~ 24759297 (+)
AMCG00014638 NA coding downstream 2232919 24888533 ~ 24897009 (+)
AMCG00014637 NA coding downstream 2272417 24928031 ~ 24937965 (+)
AMCG00014643 NA coding downstream 2431400 25087014 ~ 25102638 (+)
G71462 NA non-coding upstream 424662 22228426 ~ 22230696 (+)
G71460 NA non-coding upstream 459483 22195619 ~ 22195875 (+)
G71459 NA non-coding upstream 466431 22188639 ~ 22188927 (+)
G71452 NA non-coding upstream 532825 22119583 ~ 22122533 (+)
G71424 NA non-coding upstream 1343336 21311590 ~ 21312022 (+)
G71557 NA non-coding downstream 709146 23364760 ~ 23365002 (+)
G71574 NA non-coding downstream 941504 23597118 ~ 23597323 (+)
G71581 NA non-coding downstream 1049549 23705163 ~ 23705434 (+)
G71584 NA non-coding downstream 1252771 23908385 ~ 23908649 (+)
G71596 NA non-coding downstream 1676817 24332431 ~ 24333297 (+)
G71004 NA other upstream 4380998 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 5168308 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 6186149 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 6516326 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 6969459 15675631 ~ 15685899 (+)
G71525 NA other downstream 199728 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 4249263 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 5179889 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 5213089 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 5646759 28302373 ~ 28304073 (+)

Expression


Co-expression Network