G71835


Basic Information

Item Value
gene id G71835
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26027535 ~ 26028500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89807
ATACCAGTATATAGCCAGCTCTGGTAGTTTCAAAGGGAAGTTCCCTTTGTGTTTGTCTGGAGATGAGAGAGAGTTGCGTGTTTCTGACTTCTCTAAATTCTAGCATACATATAACCACTATCCCTTTTGCATTATTGGTCTGCTGTCCTAAGTGAGGTGGTtcttgcctttttgtttttttgaagcctttttgttttgaagcctTTTGGGGTTTTTGGCTAGTGTGCCTGgtgctttttgttatttttgtaaggaTGTGAGTCTTGGATTGCCTTTTTGAACTTTGCAtcaatttttgttcctgttggagtatttgggaaatatttttgttctttcttggTTGGATTACAAAGACATTCCTGGACCGGTCCTGGATCTTCGGCCTAGCTCAAGGAGTGGTAAGACCAGCCAGTGGCTGAgaactttatttttcaggacTTCCTTTTTGAACAAATTGTgcaagtgcaagaatacagtatTGATTGCAatgatggtactgcatgatggataagtatctgcctgtacttctcagcattgaggagaccattcattctgaccaaatcccaactccatttgcagaaatgcagccccaaacttgcaaggaacctccaccatgcttcactgttgcctgcggacactcattcgtgtaccgctctccagcccttccgCGAACagactgccttctgctacagccagatatttcacattttgactcatcagtccagagcacctgctgccatttttctgcacctcagttcctgtgttttcgtgcatagttgagtcacttggccttgttgccatgttggaggtatggctttttggccgcaagtcttccatgaaggccacttctgaccagacttctctggacagtagacgagtgtaccagggtcccactgttttctgccaattctgagctggacatcttccgattgcaaagggaagtaagcatgatgtgtctttcatctg

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89807 True 966 lncRNA 0.44 1 26027535 26028500

Neighbor

gene id symbol gene type direction distance location
AMCG00014663 NA coding downstream 125841 25901449 ~ 25901694 (-)
AMCG00014658 dock9,LOC106586262 coding downstream 175564 25774969 ~ 25851971 (-)
AMCG00014659 NA coding downstream 263616 25753848 ~ 25763919 (-)
AMCG00014656 stk24,LOC103147175 coding downstream 297903 25709634 ~ 25729632 (-)
AMCG00014650 NA coding downstream 628701 25397830 ~ 25398834 (-)
AMCG00014666 zic5,LOC102789084 coding upstream 125564 26154064 ~ 26160288 (-)
AMCG00014675 NA coding upstream 307675 26336175 ~ 26336979 (-)
AMCG00014671 tmtc4,LOC107600375 coding upstream 318000 26346500 ~ 26360991 (-)
AMCG00014673 nalcn coding upstream 375582 26404082 ~ 26428529 (-)
AMCG00014674 LOC102787851 coding upstream 400181 26428681 ~ 26480278 (-)
G71740 ipo5,kpnb3,LOC107730386,LOC107555240 non-coding downstream 435984 25590818 ~ 25591551 (-)
G71727 NA non-coding downstream 494355 25530938 ~ 25533180 (-)
G71726 rap2a,LOC106512668,LOC106582448,LOC100695037,LOC103391592 non-coding downstream 518665 25508597 ~ 25508870 (-)
G71723 NA non-coding downstream 536884 25488226 ~ 25490651 (-)
G71593 NA non-coding downstream 1871387 24155730 ~ 24156148 (-)
G71871 NA non-coding upstream 192694 26221194 ~ 26221397 (-)
G71873 NA non-coding upstream 206911 26235411 ~ 26235615 (-)
G71874 NA non-coding upstream 215044 26243544 ~ 26243813 (-)
G71875 NA non-coding upstream 237231 26265731 ~ 26266216 (-)
G71876 NA non-coding upstream 239367 26267867 ~ 26268407 (-)
AMCG00014630 LOC107672672 other downstream 3782620 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 6802305 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 6823968 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 8005440 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 8406384 17589267 ~ 17621151 (-)
AMCG00014693 NA other upstream 1256920 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 1307195 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 2301239 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 3360790 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 4813023 30841523 ~ 30846800 (-)

Expression


Co-expression Network