G71995


Basic Information

Item Value
gene id G71995
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27026775 ~ 27027272 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89992
ccaaaacagccctgacccgtcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggtaccaagacgttagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccagatcaccttcttccattgctctgtggtccagctctgatgctcatgtgcccattgtaggcgctttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcgctctccacgtgcatcaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89992 True 498 lncRNA 0.53 1 27026775 27027272

Neighbor

gene id symbol gene type direction distance location
AMCG00014690 slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767 coding upstream 46475 26977435 ~ 26980300 (+)
AMCG00014683 asmtl coding upstream 52393 26966745 ~ 26974382 (+)
AMCG00014685 NA coding upstream 64898 26925834 ~ 26961877 (+)
AMCG00014684 upf3a coding upstream 125961 26890732 ~ 26900814 (+)
AMCG00014680 NA coding upstream 136645 26886487 ~ 26890130 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding downstream 294342 27321614 ~ 27337656 (+)
AMCG00014701 NA coding downstream 455816 27483088 ~ 27491264 (+)
AMCG00014705 NA coding downstream 675812 27703084 ~ 27714268 (+)
AMCG00014706 NA coding downstream 816118 27843390 ~ 27861363 (+)
AMCG00014708 LOC106586788,LOC107081331 coding downstream 864579 27891851 ~ 27918923 (+)
G71963 NA non-coding upstream 73522 26952296 ~ 26953253 (+)
G71859 NA non-coding upstream 795210 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 1015775 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 1067073 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 1256286 25770209 ~ 25770489 (+)
G72072 NA non-coding downstream 447792 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 1213294 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 1270397 28297669 ~ 28300813 (+)
G72208 NA non-coding downstream 1310019 28337291 ~ 28341717 (+)
G72273 NA non-coding downstream 1499516 28526788 ~ 28578733 (+)
AMCG00014687 NA other upstream 115538 26904877 ~ 26911237 (+)
G71525 NA other upstream 4171129 22855342 ~ 22855646 (+)
G71004 NA other upstream 8752415 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 9539725 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 10557566 16465621 ~ 16469209 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 808231 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 841431 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 1275101 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1769777 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 2220603 29247875 ~ 29256354 (+)

Expression


Co-expression Network